HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:71.6 nTPM
HPA:71.6 nTPM
GTEx:63.9 nTPM
FANTOM5:58.4 Scaled Tags Per Million
Pig:8.8 nTPM
Mouse:28.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.6
Sample id Sample description nTPM
Hippocampus
nTPM: 44.1
1911 Female, age 85, right hemisphere 68.6
2529 Female, age 94, left hemisphere 52.3
2621 Female, age 67, right hemisphere 42.1
1898 Male, age 80, left hemisphere 35.1
2148 Female, age 91, left hemisphere 34.7
1855 Male, age 76, left hemisphere 31.9
Dentate gyrus
nTPM: 50.7
2530 Female, age 94, left hemisphere 89.5
2010 Male, age 76, both hemispheres 56.7
2528 Male, age 74, both hemispheres 53.7
2246 Female, age 85, both hemispheres 47.9
2531 Female, age 67, both hemispheres 33.0
1927 Female, age 91, both hemispheres 23.1
Entorhinal gyrus
nTPM: 44.0
2764 Male, age 80, right hemisphere 70.0
2117 Female, age 91, right hemisphere 63.6
2613 Female, age 94, left hemisphere 39.7
2686 Male, age 75, right hemisphere 31.3
1938 Female, age 85, left hemisphere 30.4
1787 Male, age 76, left hemisphere 29.1
Hippocampus, CA1
nTPM: 35.0
2082 Female, age 91, right hemisphere 53.5
1873 Female, age 85, both hemispheres 43.7
2527 Male, age 74, both hemispheres 40.4
2749 Male, age 80, left hemisphere 26.2
2045 Male, age 76, both hemispheres 11.1
Hippocampus, CA2
nTPM: 50.2
1963 Male, age 80, left hemisphere 64.7
2249 Male, age 74, both hemispheres 63.4
2113 Female, age 91, right hemisphere 51.1
1940 Female, age 85, left hemisphere 50.4
2437 Female, age 94, left hemisphere 49.4
1892 Male, age 76, both hemispheres 22.1
Hippocampus, CA3
nTPM: 31.7
1891 Female, age 85, both hemispheres 82.8
1867 Male, age 76, both hemispheres 31.7
2436 Male, age 74, both hemispheres 30.2
2137 Male, age 80, left hemisphere 20.3
2620 Female, age 94, left hemisphere 17.8
2861 Female, age 67, both hemispheres 7.2
Parahippocampal cortex
nTPM: 35.5
2692 Male, age 74, both hemispheres 62.3
2532 Female, age 72, left hemisphere 57.1
1990 Female, age 91, right hemisphere 48.2
2018 Male, age 76, both hemispheres 41.9
1850 Male, age 80, both hemispheres 34.2
2245 Female, age 91, both hemispheres 32.3
1933 Female, age 85, both hemispheres 30.8
2693 Female, age 94, both hemispheres 22.7
2250 Female, age 67, right hemisphere 15.4
2622 Female, age 67, right hemisphere 9.6
Perirhinal gyrus
nTPM: 19.4
2521 Female, age 94, right hemisphere 26.5
1794 Male, age 80, right hemisphere 21.9
2848 Male, age 76, right hemisphere 21.5
1847 Female, age 91, left hemisphere 15.9
1841 Female, age 85, right hemisphere 11.0
Subiculum
nTPM: 71.6
2042 Male, age 76, both hemispheres 118.0
1901 Male, age 80, both hemispheres 94.0
1977 Female, age 85, both hemispheres 65.3
2438 Female, age 94, left hemisphere 53.4
2619 Male, age 74, both hemispheres 53.4
2729 Female, age 91, right hemisphere 45.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.9
Samples: 197

Max nTPM: 276.4
Min nTPM: 4.8
Std nTPM: 48.9
Median nTPM: 50.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 276.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 273.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 264.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 194.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 189.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 186.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 177.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 162.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 160.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 151.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 147.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.4
FF:10153-102I9 76 years, female 78.1
FF:10169-103B7 60 years, female 38.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 13.8
Min nTPM: 4.0
Sample A Female 11.2
Sample B Female 6.5
Sample C Male 13.8
Sample D Male 4.0
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.1
Sample A Female 4.4
Sample B Female 5.0
Sample C Male 3.1
Sample D Male 4.1
Subiculum
nTPM: 3.8
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.4
Sample A Female 3.8
Sample B Female 3.7
Sample C Male 3.4
Sample D Male 4.3
Ventral hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 8.0
Min nTPM: 3.7
Sample A Female 5.7
Sample B Female 3.7
Sample C Male 5.8
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 20.4
Min nTPM: 11.1
Sample A Male 20.4
Sample B Male 16.7
Sample C Female 11.1
Sample D Female 11.8
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 41.8
Min nTPM: 17.9
Sample A Male 17.9
Sample B Male 26.7
Sample C Female 41.8
Sample D Female 28.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68637838 Antisense, RP_050126_01_G01, Mouse strain C57BL/6J (56 days, male) 0.9

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