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RPS26
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  • RPS26
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:387.6 nTPM
HPA:387.6 nTPM
GTEx:579.7 nTPM
FANTOM5:12.2 Scaled Tags Per Million

AMYGDALA - HPA Brain RNA-seq
Max nTPM 387.6
Sample id Sample description nTPM
Amygdala
nTPM: 385.4
2514 Male, age 75, right hemisphere 390.5
2695 Female, age 67, right hemisphere 390.1
2517 Female, age 94, left hemisphere 385.7
2814 Male, age 76, right hemisphere 383.1
1987 Female, age 91, left hemisphere 377.4
Basal amygdala
nTPM: 381.8
2609 Male, age 75, right hemisphere 388.1
2243 Female, age 91, right hemisphere 386.6
1955 Male, age 76, both hemispheres 383.5
2685 Female, age 94, left hemisphere 381.7
2827 Female, age 67, right hemisphere 378.2
2110 Male, age 80, left hemisphere 373.0
Central amygdala
nTPM: 387.6
2826 Female, age 94, left hemisphere 407.1
2701 Female, age 91, right hemisphere 384.2
1905 Male, age 76, both hemispheres 383.4
2239 Male, age 80, left hemisphere 382.2
2515 Male, age 75, right hemisphere 381.3
Corticomedial amygdala
nTPM: 383.0
2240 Male, age 76, both hemispheres 400.5
2242 Female, age 91, right hemisphere 390.1
2535 Female, age 67, right hemisphere 384.7
2429 Female, age 94, left hemisphere 375.8
2829 Male, age 80, left hemisphere 374.2
2428 Male, age 75, right hemisphere 372.6
Lateral amygdala
nTPM: 380.2
2534 Female, age 94, left hemisphere 395.2
2516 Male, age 75, right hemisphere 385.2
2256 Male, age 80, left hemisphere 378.6
1883 Male, age 76, both hemispheres 377.3
2255 Female, age 91, right hemisphere 373.6
2830 Female, age 67, right hemisphere 371.6
Stria terminalis, bed nucleus
nTPM: 376.8
2201 Male, age 74, unknown 383.5
1974 Female, age 91, both hemispheres 377.8
2486 Female, age 94, both hemispheres 369.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 579.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 579.7
Samples: 152

Max nTPM: 2246.5
Min nTPM: 139.9
Std nTPM: 375.7
Median nTPM: 502.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2246.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1849.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 1847.0
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1840.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 1825.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1518.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 1516.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1312.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1229.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1161.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1101.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1085.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1046.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1014.0
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 968.2
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 957.8
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 954.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 946.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 936.0
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 923.8
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 913.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 909.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 887.2
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 879.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 872.9
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 828.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 822.2
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 820.6
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 805.7
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 803.2
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 802.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 773.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 764.2
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 760.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 759.0
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 750.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 740.4
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 725.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 721.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 721.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 719.1
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 716.3
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 715.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 712.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 698.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 695.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 692.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 676.7
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 669.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 656.5
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 654.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 642.8
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 633.5
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 631.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 630.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 630.4
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 628.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 623.9
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 622.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 608.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 603.9
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 602.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 597.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 592.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 584.2
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 581.8
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 580.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 575.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 571.3
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 568.1
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 540.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 536.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 527.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 506.9
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 506.5
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 503.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 502.5
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 495.9
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 484.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 470.4
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 468.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 467.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 464.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 461.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 455.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 454.0
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 447.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 445.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 445.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 436.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 430.8
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 421.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 409.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 403.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 402.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 395.5
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 390.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 378.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 378.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 367.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 349.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 344.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 343.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 326.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 321.0
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 314.0
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 306.2
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 304.7
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 301.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 299.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 295.4
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 293.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 287.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 281.0
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 273.5
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 268.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 267.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 260.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 259.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 259.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 259.2
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 256.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 253.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 252.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 252.1
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 250.9
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 248.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 245.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 244.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 244.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 244.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 242.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 241.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 239.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 235.4
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 235.2
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 230.6
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 223.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 221.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 221.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 219.4
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 218.3
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 207.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 204.5
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 193.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 192.7
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 190.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 181.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 181.2
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 174.7
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 158.0
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 139.9
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 12.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 12.2
FF:10151-102I7 76 years, female 12.2

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