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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:578.3 nTPM
GTEx:578.3 nTPM
FANTOM5:773.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004426Antibody CAB004647
Squamous epithelial cells MediumHigh



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 578.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 578.3
Samples: 156

Max nTPM: 1119.7
Min nTPM: 260.0
Std nTPM: 161.7
Median nTPM: 569.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1119.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1095.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 942.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 940.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 936.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 916.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 916.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 888.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 873.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 869.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 856.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 853.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 787.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 786.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 786.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 751.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 750.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 749.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 748.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 743.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 740.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 739.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 739.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 738.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 727.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 719.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 716.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 713.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 710.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 707.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 705.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 703.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 703.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 685.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 684.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 680.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 679.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 678.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 674.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 672.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 669.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 668.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 665.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 663.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 660.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 659.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 656.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 654.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 652.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 650.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 649.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 645.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 640.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 638.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 638.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 635.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 634.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 633.8
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 632.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 628.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 616.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 616.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 613.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 606.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 606.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 606.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 604.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 604.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 603.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 592.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 592.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 580.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 580.1
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 576.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 574.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 572.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 572.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 569.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 569.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 566.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 565.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 565.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 558.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 556.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 550.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 547.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 545.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 543.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 538.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 537.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 535.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 529.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 523.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 523.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 514.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 511.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 507.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 500.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 499.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 497.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 496.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 495.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 493.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 492.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 490.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 489.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 489.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 488.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 488.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 486.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 485.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 481.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 478.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 470.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 467.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 466.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 466.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 462.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 458.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 457.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 456.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 455.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 451.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 448.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 442.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 441.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 436.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 431.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 424.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 423.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 419.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 416.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 412.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 406.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 403.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 402.8
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 402.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 396.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 392.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 382.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 379.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 372.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 369.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 369.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 360.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 355.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 351.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 350.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 344.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 316.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 315.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 311.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 287.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 268.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 267.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 260.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 773.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 773.2
FF:10204-103F6 68 years, female 773.2

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