HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:72.4 nTPM
HPA:72.4 nTPM
GTEx:92.2 nTPM
FANTOM5:94.8 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:71.5 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003340Antibody CAB025484
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.4
Sample id Sample description nTPM
Hippocampus
nTPM: 71.1
1898 Male, age 80, left hemisphere 79.5
1855 Male, age 76, left hemisphere 76.8
2529 Female, age 94, left hemisphere 71.3
2621 Female, age 67, right hemisphere 69.5
2148 Female, age 91, left hemisphere 65.0
1911 Female, age 85, right hemisphere 64.5
Dentate gyrus
nTPM: 72.4
2010 Male, age 76, both hemispheres 91.8
2528 Male, age 74, both hemispheres 75.5
2530 Female, age 94, left hemisphere 71.0
2246 Female, age 85, both hemispheres 69.1
2531 Female, age 67, both hemispheres 66.9
1927 Female, age 91, both hemispheres 60.1
Entorhinal gyrus
nTPM: 62.0
2117 Female, age 91, right hemisphere 68.1
1787 Male, age 76, left hemisphere 64.9
2764 Male, age 80, right hemisphere 63.7
1938 Female, age 85, left hemisphere 60.0
2686 Male, age 75, right hemisphere 59.5
2613 Female, age 94, left hemisphere 55.7
Hippocampus, CA1
nTPM: 68.6
2045 Male, age 76, both hemispheres 77.4
2082 Female, age 91, right hemisphere 70.9
1873 Female, age 85, both hemispheres 67.7
2527 Male, age 74, both hemispheres 67.4
2749 Male, age 80, left hemisphere 59.6
Hippocampus, CA2
nTPM: 69.6
2249 Male, age 74, both hemispheres 83.5
2437 Female, age 94, left hemisphere 72.1
1892 Male, age 76, both hemispheres 66.8
1940 Female, age 85, left hemisphere 66.2
2113 Female, age 91, right hemisphere 65.7
1963 Male, age 80, left hemisphere 63.3
Hippocampus, CA3
nTPM: 68.2
1867 Male, age 76, both hemispheres 73.9
2436 Male, age 74, both hemispheres 70.0
1891 Female, age 85, both hemispheres 69.8
2620 Female, age 94, left hemisphere 65.8
2137 Male, age 80, left hemisphere 65.3
2861 Female, age 67, both hemispheres 64.2
Parahippocampal cortex
nTPM: 62.3
2018 Male, age 76, both hemispheres 75.0
1850 Male, age 80, both hemispheres 64.3
2250 Female, age 67, right hemisphere 63.6
2245 Female, age 91, both hemispheres 63.1
1933 Female, age 85, both hemispheres 61.0
1990 Female, age 91, right hemisphere 60.2
2532 Female, age 72, left hemisphere 60.1
2693 Female, age 94, both hemispheres 59.2
2692 Male, age 74, both hemispheres 58.4
2622 Female, age 67, right hemisphere 58.1
Perirhinal gyrus
nTPM: 62.4
1847 Female, age 91, left hemisphere 66.2
2521 Female, age 94, right hemisphere 63.2
2848 Male, age 76, right hemisphere 62.0
1794 Male, age 80, right hemisphere 61.8
1841 Female, age 85, right hemisphere 59.0
Subiculum
nTPM: 68.2
2042 Male, age 76, both hemispheres 78.8
1901 Male, age 80, both hemispheres 70.3
2729 Female, age 91, right hemisphere 68.6
1977 Female, age 85, both hemispheres 66.8
2619 Male, age 74, both hemispheres 63.2
2438 Female, age 94, left hemisphere 61.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.2
Samples: 197

Max nTPM: 667.3
Min nTPM: 15.5
Std nTPM: 79.2
Median nTPM: 74.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 667.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 492.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 415.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 354.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 346.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 316.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 283.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 278.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 272.7
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 261.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 243.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.8
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 86.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 11.4
Min nTPM: 5.8
Sample A Female 11.4
Sample B Female 7.9
Sample C Male 8.4
Sample D Male 5.8
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.8
Sample A Female 8.3
Sample B Female 6.9
Sample C Male 6.8
Sample D Male 6.8
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.2
Sample A Female 8.3
Sample B Female 7.2
Sample C Male 9.3
Sample D Male 10.3
Ventral hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 8.0
Sample A Female 19.0
Sample B Female 8.3
Sample C Male 16.8
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.5
Samples: 4

Max nTPM: 78.2
Min nTPM: 60.0
Sample A Male 60.0
Sample B Male 74.3
Sample C Female 73.6
Sample D Female 78.2
Hippocampal formation
nTPM: 51.2
Samples: 4

Max nTPM: 68.0
Min nTPM: 35.5
Sample A Male 68.0
Sample B Male 48.0
Sample C Female 35.5
Sample D Female 53.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
70560277 Antisense, RP_050330_01_A11, Mouse strain C57BL/6J (56 days, male) 2.0
79760442 Antisense, RP_071204_02_E10, Mouse strain C57BL/6J (56 days, male) 0.6

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