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S100A10
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:98.2 nTPM
HPA:98.2 nTPM
GTEx:188.5 nTPM
FANTOM5:248.7 Scaled Tags Per Million
Pig:50.5 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 98.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 96.9
1981 Female, age 72, midline 129.1
2048 Male, age 55, midline 106.1
2565 Male, age 75, midline 84.9
2816 Male, age 47, midline 84.5
2194 Female, age 79, both hemispheres 79.7
Cervical spinal cord, dorsal horn
nTPM: 96.8
2173 Female, age 72, unknown 138.8
2296 Male, age 66, both hemispheres 107.3
2069 Male, age 47, both hemispheres 97.6
2721 Male, age 90, both hemispheres 92.2
1877 Male, age 55, unknown 81.8
2297 Male, age 75, both hemispheres 63.2
Cervical spinal cord, ventral horn
nTPM: 98.2
2098 Female, age 72, unknown 207.8
2809 Male, age 90, both hemispheres 100.6
2068 Male, age 55, unknown 72.6
2480 Male, age 75, both hemispheres 71.5
2295 Male, age 66, both hemispheres 70.3
2820 Female, age 79, both hemispheres 66.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 188.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 188.5
Samples: 159

Max nTPM: 793.5
Min nTPM: 47.8
Std nTPM: 115.5
Median nTPM: 158.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 793.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 706.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 706.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 590.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 484.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 455.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 447.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 410.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 405.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 383.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 373.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 367.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 351.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 319.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 314.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 306.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 304.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 277.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 274.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 273.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 267.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 260.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 257.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 249.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 247.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 241.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 240.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 238.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 238.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 235.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 235.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 234.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 230.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 229.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 226.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 226.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 226.0
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 224.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 222.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 221.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 218.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 218.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 217.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 216.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 216.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 214.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 213.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 211.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 208.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 206.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 203.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 199.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 198.2
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 196.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 192.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 187.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 186.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 185.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 184.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 184.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 182.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 180.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 179.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 177.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 172.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 171.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 171.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 170.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 168.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 167.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 167.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 166.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 166.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 164.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 164.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 164.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 163.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 161.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 159.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 158.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 157.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 154.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 153.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 153.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 152.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 150.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 148.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 148.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 145.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 142.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 141.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 140.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 139.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 138.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 137.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 135.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 135.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 134.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 133.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 133.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 133.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 132.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 132.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 132.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 132.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 131.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 130.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 129.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 128.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 127.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 127.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 126.4
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 125.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 124.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 124.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 123.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 123.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 123.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 123.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 121.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 121.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 120.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 120.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 119.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 119.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 117.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 117.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 116.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 116.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 116.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 115.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 115.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 114.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 113.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 112.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 111.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 110.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 107.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 103.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 103.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 101.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 96.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 96.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 96.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 96.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 94.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 91.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 91.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 83.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 83.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 80.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 79.7
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 76.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 63.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 61.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 60.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 56.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 56.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 47.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 248.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 248.7
FF:10181-103D1 60 years, female 292.9
FF:10159-103A6 76 years, female 204.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 38.9
Samples: 4

Max nTPM: 69.4
Min nTPM: 20.1
Sample A Female 20.1
Sample B Female 36.4
Sample C Male 69.4
Sample D Male 29.5
Ventral spinal cord
nTPM: 50.5
Samples: 4

Max nTPM: 65.9
Min nTPM: 34.3
Sample A Female 45.6
Sample B Female 56.0
Sample C Male 65.9
Sample D Male 34.3

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