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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:379.0 nTPM
FANTOM5:46.2 Scaled Tags Per Million
Pig:302.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA000857
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 379.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 379.0
Samples: 246

Max nTPM: 856.9
Min nTPM: 199.4
Std nTPM: 99.5
Median nTPM: 366.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 856.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 720.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 709.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 681.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 670.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 626.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 611.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 600.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 600.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 596.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 591.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 586.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 583.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 579.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 571.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 566.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 565.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 561.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 544.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 539.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 520.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 517.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 502.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 500.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 500.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 493.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 486.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 483.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 481.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 480.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 475.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 472.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 470.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 469.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 466.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 465.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 464.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 461.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 461.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 458.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 455.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 450.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 449.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 447.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 447.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 447.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 446.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 446.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 445.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 444.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 443.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 441.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 438.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 438.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 437.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 436.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 434.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 434.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 432.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 429.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 427.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 427.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 425.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 423.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 423.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 421.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 421.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 420.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 419.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 415.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 415.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 413.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 413.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 413.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 412.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 411.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 406.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 406.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 406.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 405.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 405.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 404.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 404.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 403.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 402.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 402.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 402.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 401.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 399.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 398.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 397.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 396.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 394.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 394.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 389.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 389.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 387.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 386.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 385.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 384.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 383.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 383.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 381.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 381.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 380.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 379.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 379.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 378.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 378.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 377.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 377.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 375.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 374.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 374.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 373.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 372.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 372.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 372.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 371.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 370.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 368.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 368.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 367.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 365.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 364.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 364.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 362.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 361.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 361.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 359.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 358.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 358.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 357.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 354.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 354.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 353.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 352.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 351.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 351.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 350.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 349.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 348.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 347.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 345.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 345.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 344.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 344.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 343.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 343.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 341.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 340.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 339.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 339.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 337.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 336.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 335.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 335.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 332.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 331.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 330.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 329.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 328.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 327.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 325.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 323.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 321.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 321.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 319.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 319.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 318.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 318.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 315.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 314.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 312.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 311.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 311.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 310.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 309.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 308.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 308.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 307.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 306.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 306.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 306.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 305.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 302.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 302.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 300.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 299.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 299.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 299.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 299.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 298.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 298.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 297.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 297.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 296.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 293.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 293.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 292.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 292.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 290.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 290.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 289.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 289.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 289.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 288.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 288.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 287.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 282.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 282.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 280.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 279.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 279.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 278.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 277.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 276.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 275.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 275.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 274.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 274.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 271.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 271.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 271.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 271.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 270.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 270.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 270.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 268.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 265.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 264.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 261.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 258.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 255.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 249.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 249.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 247.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 245.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 242.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 237.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 234.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 232.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 218.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 209.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 199.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 46.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 46.2
FF:10164-103B2 76 years, female 46.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 302.4
Pig sample Sample description nTPM
Caudate
nTPM: 302.4
Samples: 4

Max nTPM: 343.8
Min nTPM: 252.4
Sample A Female 312.5
Sample B Female 300.7
Sample C Male 343.8
Sample D Male 252.4

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