HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.1 nTPM
HPA:34.1 nTPM
GTEx:36.4 nTPM
FANTOM5:41.9 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:14.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060452Antibody HPA062492
Glial cells Not detectedNot detected
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
2529 Female, age 94, left hemisphere 33.5
1898 Male, age 80, left hemisphere 33.4
2621 Female, age 67, right hemisphere 32.8
1855 Male, age 76, left hemisphere 32.5
2148 Female, age 91, left hemisphere 32.1
1911 Female, age 85, right hemisphere 31.6
Dentate gyrus
nTPM: 32.8
2530 Female, age 94, left hemisphere 38.4
2010 Male, age 76, both hemispheres 33.7
2531 Female, age 67, both hemispheres 32.1
2246 Female, age 85, both hemispheres 32.0
1927 Female, age 91, both hemispheres 30.3
2528 Male, age 74, both hemispheres 30.1
Entorhinal gyrus
nTPM: 34.1
2686 Male, age 75, right hemisphere 40.1
2117 Female, age 91, right hemisphere 34.0
2764 Male, age 80, right hemisphere 33.3
1787 Male, age 76, left hemisphere 32.9
2613 Female, age 94, left hemisphere 32.3
1938 Female, age 85, left hemisphere 32.1
Hippocampus, CA1
nTPM: 31.2
2749 Male, age 80, left hemisphere 32.3
1873 Female, age 85, both hemispheres 31.9
2082 Female, age 91, right hemisphere 31.1
2045 Male, age 76, both hemispheres 30.6
2527 Male, age 74, both hemispheres 30.4
Hippocampus, CA2
nTPM: 32.3
2437 Female, age 94, left hemisphere 35.0
1963 Male, age 80, left hemisphere 33.3
1940 Female, age 85, left hemisphere 32.4
1892 Male, age 76, both hemispheres 31.6
2113 Female, age 91, right hemisphere 31.4
2249 Male, age 74, both hemispheres 30.2
Hippocampus, CA3
nTPM: 30.7
1891 Female, age 85, both hemispheres 34.0
2861 Female, age 67, both hemispheres 31.7
1867 Male, age 76, both hemispheres 31.5
2137 Male, age 80, left hemisphere 29.9
2620 Female, age 94, left hemisphere 29.8
2436 Male, age 74, both hemispheres 27.5
Parahippocampal cortex
nTPM: 32.7
2622 Female, age 67, right hemisphere 35.0
2692 Male, age 74, both hemispheres 34.4
2532 Female, age 72, left hemisphere 33.5
2018 Male, age 76, both hemispheres 33.3
1850 Male, age 80, both hemispheres 32.9
2245 Female, age 91, both hemispheres 32.5
1990 Female, age 91, right hemisphere 32.4
1933 Female, age 85, both hemispheres 32.1
2693 Female, age 94, both hemispheres 30.5
2250 Female, age 67, right hemisphere 30.4
Perirhinal gyrus
nTPM: 31.7
1841 Female, age 85, right hemisphere 32.7
2848 Male, age 76, right hemisphere 32.2
1794 Male, age 80, right hemisphere 32.1
1847 Female, age 91, left hemisphere 32.0
2521 Female, age 94, right hemisphere 29.3
Subiculum
nTPM: 33.6
2438 Female, age 94, left hemisphere 36.6
2042 Male, age 76, both hemispheres 34.5
1901 Male, age 80, both hemispheres 34.3
1977 Female, age 85, both hemispheres 32.8
2619 Male, age 74, both hemispheres 31.8
2729 Female, age 91, right hemisphere 31.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 100.4
Min nTPM: 14.3
Std nTPM: 13.7
Median nTPM: 33.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 100.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 96.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 86.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 77.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 76.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 67.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 66.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 64.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 64.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 63.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 61.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.9
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 40.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 24.1
Min nTPM: 13.2
Sample A Female 24.1
Sample B Female 20.9
Sample C Male 23.0
Sample D Male 13.2
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 15.0
Sample A Female 16.4
Sample B Female 17.6
Sample C Male 18.9
Sample D Male 15.0
Subiculum
nTPM: 20.4
Samples: 4

Max nTPM: 23.6
Min nTPM: 17.0
Sample A Female 23.6
Sample B Female 19.8
Sample C Male 21.1
Sample D Male 17.0
Ventral hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 24.1
Min nTPM: 14.4
Sample A Female 16.4
Sample B Female 14.4
Sample C Male 24.1
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.6
Sample A Male 13.2
Sample B Male 13.9
Sample C Female 14.6
Sample D Female 10.6
Hippocampal formation
nTPM: 14.1
Samples: 4

Max nTPM: 17.5
Min nTPM: 12.4
Sample A Male 17.5
Sample B Male 12.4
Sample C Female 14.1
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75828199 Antisense, RP_060601_01_G11, Mouse strain C57BL/6J (56 days, male) 0.4

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