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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:13167.2 nTPM
HPA:13167.2 nTPM
Pig:4235.2 nTPM

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 13167.2
Sample id Sample description nTPM
Area postrema
nTPM: 10552.7
2306 Male, age 80, both hemispheres 20204.1
2799 Male, age 61, both hemispheres 10815.9
2054 Male, age 76, both hemispheres 638.2
Cuneate nuclei
nTPM: 9973.0
2381 Male, age 80, both hemispheres 17523.9
2131 Male, age 76, both hemispheres 9671.5
2376 Male, age 61, both hemispheres 2723.7
Dorsal medullary reticular nucleus
nTPM: 3810.2
2373 Male, age 61, both hemispheres 6408.0
2088 Male, age 76, both hemispheres 5022.7
2040 Female, age 85, both hemispheres 0.0
Dorsal motor vagal complex
nTPM: 8999.0
2797 Male, age 61, both hemispheres 23510.6
2807 Female, age 85, both hemispheres 19555.9
2185 Male, age 76, both hemispheres 13816.6
2813 Female, age 72, unknown 6132.5
2643 Male, age 74, both hemispheres 5570.9
2844 Male, age 55, unknown 3405.2
2000 Male, age 74, unknown 0.0
2133 Female, age 91, both hemispheres 0.0
Gigantocellular reticular nuclei, medullary
nTPM: 6181.9
2310 Male, age 80, both hemispheres 15469.4
2387 Female, age 91, both hemispheres 11625.8
2314 Male, age 61, both hemispheres 8613.9
2462 Male, age 74, both hemispheres 1382.7
1876 Female, age 85, both hemispheres 0.0
2022 Male, age 76, right hemisphere 0.0
Gigantocellular reticular nuclei, pars
nTPM: 11817.6
2330 Male, age 80, both hemispheres 31069.5
2706 Male, age 80, both hemispheres 17625.7
2336 Male, age 61, both hemispheres 5412.4
2168 Male, age 76, both hemispheres 3648.2
2084 Female, age 85, both hemispheres 1332.1
Inferior olive
nTPM: 6831.2
2628 Female, age 91, both hemispheres 18205.2
2379 Male, age 80, both hemispheres 13144.0
2178 Male, age 61, both hemispheres 1680.3
2085 Female, age 85, both hemispheres 1126.4
2563 Male, age 74, both hemispheres 0.0
Lateral medullary reticular nucleus
nTPM: 3656.4
2374 Male, age 61, both hemispheres 12582.2
2804 Female, age 91, both hemispheres 6756.9
2190 Female, age 85, both hemispheres 2599.7
2044 Male, age 76, both hemispheres 0.0
2305 Male, age 74, both hemispheres 0.0
2852 Male, age 80, both hemispheres 0.0
Medial vestibular nucleus
nTPM: 4093.7
2624 Male, age 61, both hemispheres 11682.1
2134 Male, age 76, both hemispheres 6140.1
2803 Female, age 91, both hemispheres 4283.3
2801 Male, age 74, both hemispheres 2358.7
2093 Male, age 80, both hemispheres 97.9
2743 Female, age 85, both hemispheres 0.0
Motor hypoglossal nucleus
nTPM: 7304.5
2461 Male, age 61, both hemispheres 22083.7
2182 Male, age 80, both hemispheres 8355.2
2132 Female, age 85, both hemispheres 6083.8
2125 Female, age 91, both hemispheres 0.0
2277 Male, age 76, both hemispheres 0.0
Nucleus ambiguus
nTPM: 0.0
2071 Male, age 76, both hemispheres 0.0
2096 Female, age 85, both hemispheres 0.0
Nucleus cuneatus
nTPM: 12497.8
2805 Female, age 91, both hemispheres 27861.5
2808 Female, age 85, both hemispheres 16099.3
2380 Male, age 80, both hemispheres 13596.2
2100 Male, age 76, both hemispheres 7774.0
2562 Male, age 61, both hemispheres 7148.4
2564 Male, age 74, both hemispheres 2507.5
Nucleus gracilis
nTPM: 13167.2
2299 Female, age 85, both hemispheres 22495.8
2382 Male, age 80, both hemispheres 16041.8
2627 Male, age 74, both hemispheres 964.0
Nucleus raphe magnus
nTPM: 6303.3
2328 Male, age 80, both hemispheres 13419.0
2459 Female, age 91, both hemispheres 12163.3
2172 Female, age 85, both hemispheres 9203.8
2455 Male, age 74, both hemispheres 3033.9
2051 Male, age 76, both hemispheres 0.0
2160 Male, age 61, both hemispheres 0.0
Nucleus raphe obscurus
nTPM: 0.0
2142 Male, age 76, midline 0.0
2800 Male, age 61, midline 0.0
2845 Female, age 85, midline 0.0
Nucleus raphe pallidus
nTPM: 139.0
2183 Male, age 80, midline 417.0
1924 Male, age 61, midline 0.0
2145 Male, age 76, midline 0.0
Nucleus tractus solitarii
nTPM: 6162.1
2307 Male, age 80, both hemispheres 13943.6
2191 Female, age 85, both hemispheres 9974.1
2656 Male, age 76, both hemispheres 730.8
2144 Female, age 91, right hemisphere 0.0
Parvicellular reticular nuclei
nTPM: 1730.3
2095 Male, age 76, both hemispheres 3435.5
2558 Male, age 74, both hemispheres 1755.3
2119 Male, age 80, both hemispheres 0.0
Parvicellular reticular nuclei, medullary
nTPM: 2759.0
2181 Male, age 80, left hemisphere 6683.0
2189 Female, age 91, both hemispheres 1048.7
2091 Female, age 85, both hemispheres 545.4
Peritrigeminal nucleus
nTPM: 723.9
2136 Male, age 76, both hemispheres 2171.7
2067 Female, age 85, both hemispheres 0.0
2179 Male, age 61, both hemispheres 0.0
Prepositus hypoglossal nucleus
nTPM: 457.9
2855 Female, age 85, right hemisphere 915.9
2086 Male, age 80, both hemispheres 0.0
Spinal trigeminal nucleus, caudal
nTPM: 7552.7
2308 Male, age 80, both hemispheres 13024.2
2390 Female, age 91, both hemispheres 12462.1
2447 Male, age 76, both hemispheres 6893.6
2312 Male, age 61, both hemispheres 3091.7
2642 Male, age 74, both hemispheres 2291.9
Spinal trigeminal nucleus, interpolar
nTPM: 4141.9
2389 Female, age 91, both hemispheres 11061.3
2625 Male, age 61, both hemispheres 9519.3
2066 Male, age 76, right hemisphere 129.2
2033 Male, age 80, both hemispheres 0.0
2386 Female, age 85, both hemispheres 0.0
Spinal vestibular nucleus
nTPM: 2764.7
2796 Male, age 61, both hemispheres 8943.0
2806 Female, age 85, both hemispheres 4915.4
2748 Male, age 76, both hemispheres 1665.3
2186 Female, age 91, both hemispheres 1064.3
2384 Male, age 74, both hemispheres 0.0
2780 Male, age 80, both hemispheres 0.0
Ventral medullary reticular nucleus
nTPM: 4759.7
2372 Male, age 61, both hemispheres 7058.8
2060 Male, age 76, both hemispheres 2460.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2067.6
2302 Female, age 91, both hemispheres 7563.5
2180 Male, age 61, both hemispheres 2256.7
2118 Male, age 80, both hemispheres 518.0
1986 Male, age 76, both hemispheres 0.0
2741 Female, age 85, both hemispheres 0.0

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 4235.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 4235.2
Samples: 4

Max nTPM: 6370.4
Min nTPM: 2535.4
Sample A Female 6370.4
Sample B Female 3983.9
Sample C Male 4051.0
Sample D Male 2535.4

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