PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:105.0 nTPM
HPA:105.0 nTPM
FANTOM5:80.9 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:8.5 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 105.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 88.7
2301 Female, age 85, both hemispheres 98.6
2090 Male, age 80, both hemispheres 98.0
2188 Female, age 91, both hemispheres 96.1
1984 Male, age 76, both hemispheres 61.9
Area postrema
nTPM: 86.8
2306 Male, age 80, both hemispheres 119.4
2799 Male, age 61, both hemispheres 72.5
2054 Male, age 76, both hemispheres 68.5
Cuneate nuclei
nTPM: 91.6
2376 Male, age 61, both hemispheres 97.8
2381 Male, age 80, both hemispheres 88.7
2131 Male, age 76, both hemispheres 88.4
Dorsal cochlear nucleus
nTPM: 79.4
2378 Male, age 80, both hemispheres 85.2
2370 Male, age 61, both hemispheres 81.0
2187 Female, age 91, both hemispheres 77.8
2058 Male, age 76, both hemispheres 77.3
2802 Male, age 74, right hemisphere 75.9
Dorsal medullary reticular nucleus
nTPM: 91.0
2373 Male, age 61, both hemispheres 107.4
2088 Male, age 76, both hemispheres 89.8
2040 Female, age 85, both hemispheres 76.0
Dorsal motor vagal complex
nTPM: 74.2
2185 Male, age 76, both hemispheres 106.8
2643 Male, age 74, both hemispheres 78.2
2797 Male, age 61, both hemispheres 73.9
2807 Female, age 85, both hemispheres 73.5
2000 Male, age 74, unknown 71.4
2844 Male, age 55, unknown 66.3
2813 Female, age 72, unknown 63.3
2133 Female, age 91, both hemispheres 60.0
Dorsal tegmental nucleus
nTPM: 75.4
2083 Male, age 80, both hemispheres 83.0
1936 Male, age 76, left hemisphere 81.1
2326 Male, age 74, both hemispheres 75.1
2358 Male, age 61, both hemispheres 62.5
Dorsolateral tegmental area
nTPM: 81.9
2337 Male, age 61, both hemispheres 107.8
2751 Female, age 85, both hemispheres 87.4
2654 Male, age 80, both hemispheres 79.8
2360 Male, age 74, both hemispheres 70.0
2141 Male, age 76, both hemispheres 64.6
Gigantocellular reticular nuclei, medullary
nTPM: 83.4
2314 Male, age 61, both hemispheres 116.5
2022 Male, age 76, right hemisphere 83.8
1876 Female, age 85, both hemispheres 82.7
2387 Female, age 91, both hemispheres 79.8
2310 Male, age 80, both hemispheres 76.0
2462 Male, age 74, both hemispheres 61.5
Gigantocellular reticular nuclei, pars
nTPM: 83.3
2336 Male, age 61, both hemispheres 96.0
2330 Male, age 80, both hemispheres 85.6
2706 Male, age 80, both hemispheres 84.3
2084 Female, age 85, both hemispheres 81.1
2168 Male, age 76, both hemispheres 69.3
Inferior olive
nTPM: 85.8
2178 Male, age 61, both hemispheres 111.6
2379 Male, age 80, both hemispheres 83.5
2628 Female, age 91, both hemispheres 83.0
2563 Male, age 74, both hemispheres 75.5
2085 Female, age 85, both hemispheres 75.3
Kolliker-Fuse nucleus
nTPM: 79.2
2793 Female, age 91, left hemisphere 103.9
2163 Male, age 80, both hemispheres 71.9
2315 Male, age 76, right hemisphere 61.8
Lateral lemniscal nuclei
nTPM: 81.1
2320 Female, age 91, left hemisphere 95.4
2746 Female, age 85, left hemisphere 90.8
2036 Male, age 80, both hemispheres 78.5
2169 Male, age 76, both hemispheres 72.1
2453 Male, age 74, right hemisphere 68.6
Lateral medullary reticular nucleus
nTPM: 92.1
2852 Male, age 80, both hemispheres 119.3
2374 Male, age 61, both hemispheres 104.5
2305 Male, age 74, both hemispheres 88.4
2190 Female, age 85, both hemispheres 88.1
2044 Male, age 76, both hemispheres 85.2
2804 Female, age 91, both hemispheres 67.0
Lateral parabrachial nucleus
nTPM: 90.2
2792 Male, age 76, both hemispheres 103.4
2013 Male, age 80, both hemispheres 96.5
2790 Male, age 61, both hemispheres 92.9
2139 Female, age 85, right hemisphere 67.9
Lateral vestibular nucleus
nTPM: 86.9
2184 Male, age 76, both hemispheres 92.8
2311 Male, age 80, both hemispheres 81.0
Locus coeruleus
nTPM: 54.3
2162 Male, age 80, both hemispheres 60.8
2720 Male, age 74, both hemispheres 60.2
2317 Female, age 72, unknown 58.6
2123 Female, age 91, both hemispheres 50.5
2014 Male, age 55, unknown 50.3
1980 Male, age 76, both hemispheres 49.7
2788 Male, age 74, unknown 49.6
Medial olivary nucleus
nTPM: 101.5
1943 Male, age 61, both hemispheres 137.7
2851 Male, age 80, both hemispheres 95.5
1962 Male, age 76, both hemispheres 86.8
2138 Female, age 91, both hemispheres 86.2
Medial parabrachial nucleus
nTPM: 85.8
2156 Male, age 61, both hemispheres 93.4
2786 Male, age 76, both hemispheres 92.2
2463 Female, age 85, right hemisphere 85.6
2170 Female, age 91, both hemispheres 82.4
2854 Male, age 80, both hemispheres 75.6
Medial periolivary nuclei
nTPM: 77.9
2081 Male, age 80, both hemispheres 101.2
2458 Female, age 91, both hemispheres 93.7
2791 Male, age 74, right hemisphere 72.7
2063 Male, age 76, both hemispheres 60.9
2171 Female, age 85, both hemispheres 60.9
Medial vestibular nucleus
nTPM: 71.4
2093 Male, age 80, both hemispheres 78.6
2624 Male, age 61, both hemispheres 75.5
2803 Female, age 91, both hemispheres 74.2
2801 Male, age 74, both hemispheres 73.4
2743 Female, age 85, both hemispheres 68.4
2134 Male, age 76, both hemispheres 58.1
Motor facial nucleus
nTPM: 77.8
2126 Male, age 61, both hemispheres 103.2
2697 Female, age 85, both hemispheres 99.0
2327 Male, age 80, both hemispheres 70.0
2365 Male, age 74, right hemisphere 69.9
2795 Female, age 91, both hemispheres 68.8
2062 Male, age 76, both hemispheres 56.1
Motor hypoglossal nucleus
nTPM: 75.0
2182 Male, age 80, both hemispheres 98.2
2125 Female, age 91, both hemispheres 79.9
2132 Female, age 85, both hemispheres 73.9
2461 Male, age 61, both hemispheres 64.7
2277 Male, age 76, both hemispheres 58.4
Motor trigeminal nucleus
nTPM: 89.4
2321 Female, age 91, both hemispheres 98.9
2309 Male, age 76, both hemispheres 96.6
2560 Male, age 74, both hemispheres 85.2
2335 Male, age 61, both hemispheres 83.2
2079 Male, age 80, both hemispheres 83.1
Nuclei of the trapezoid body
nTPM: 70.7
2166 Male, age 80, both hemispheres 95.0
2159 Male, age 61, both hemispheres 75.8
2368 Female, age 91, both hemispheres 75.7
1983 Male, age 76, both hemispheres 57.5
2735 Female, age 85, both hemispheres 49.4
Nucleus ambiguus
nTPM: 104.3
2096 Female, age 85, both hemispheres 116.8
2071 Male, age 76, both hemispheres 91.9
Nucleus cuneatus
nTPM: 91.1
2380 Male, age 80, both hemispheres 107.2
2100 Male, age 76, both hemispheres 99.6
2808 Female, age 85, both hemispheres 91.0
2805 Female, age 91, both hemispheres 89.5
2564 Male, age 74, both hemispheres 80.0
2562 Male, age 61, both hemispheres 79.3
Nucleus gracilis
nTPM: 99.1
2382 Male, age 80, both hemispheres 112.4
2299 Female, age 85, both hemispheres 99.0
2627 Male, age 74, both hemispheres 85.8
Nucleus raphe magnus
nTPM: 69.9
2459 Female, age 91, both hemispheres 86.6
2328 Male, age 80, both hemispheres 83.4
2051 Male, age 76, both hemispheres 83.1
2455 Male, age 74, both hemispheres 65.9
2172 Female, age 85, both hemispheres 51.3
2160 Male, age 61, both hemispheres 49.1
Nucleus raphe obscurus
nTPM: 105.0
2142 Male, age 76, midline 114.4
2800 Male, age 61, midline 108.0
2845 Female, age 85, midline 92.6
Nucleus raphe pallidus
nTPM: 88.1
1924 Male, age 61, midline 95.7
2145 Male, age 76, midline 84.6
2183 Male, age 80, midline 83.9
Nucleus tractus solitarii
nTPM: 58.1
2307 Male, age 80, both hemispheres 67.4
2656 Male, age 76, both hemispheres 64.6
2191 Female, age 85, both hemispheres 57.6
2144 Female, age 91, right hemisphere 42.7
Paramedian reticular nucleus
nTPM: 71.2
2057 Male, age 80, both hemispheres 80.2
2052 Male, age 76, both hemispheres 72.3
2050 Female, age 85, both hemispheres 69.0
2313 Male, age 61, both hemispheres 63.4
Parvicellular reticular nuclei
nTPM: 83.2
2119 Male, age 80, both hemispheres 87.3
2095 Male, age 76, both hemispheres 84.7
2558 Male, age 74, both hemispheres 77.7
Parvicellular reticular nuclei, medullary
nTPM: 72.1
2189 Female, age 91, both hemispheres 78.6
2091 Female, age 85, both hemispheres 70.5
2181 Male, age 80, left hemisphere 67.1
Peritrigeminal nucleus
nTPM: 76.1
2179 Male, age 61, both hemispheres 80.4
2136 Male, age 76, both hemispheres 77.3
2067 Female, age 85, both hemispheres 70.6
Pontine nuclei
nTPM: 87.2
2115 Male, age 80, left hemisphere 112.8
2319 Female, age 91, both hemispheres 109.1
1968 Male, age 76, left hemisphere 95.3
2454 Male, age 74, left hemisphere 89.8
2109 Female, age 72, unknown 80.8
2787 Female, age 85, both hemispheres 72.9
1863 Male, age 55, unknown 69.8
2727 Male, age 61, right hemisphere 67.0
Pontine raphe nucleus
nTPM: 64.4
2122 Female, age 85, midline 64.7
2853 Male, age 76, midline 64.0
Posteroventral cochlear nucleus
nTPM: 95.2
2135 Female, age 91, both hemispheres 127.3
2341 Male, age 80, both hemispheres 102.1
2070 Male, age 76, both hemispheres 92.9
2371 Male, age 61, both hemispheres 90.9
2752 Female, age 85, both hemispheres 62.8
Prepositus hypoglossal nucleus
nTPM: 70.3
2086 Male, age 80, both hemispheres 71.6
2855 Female, age 85, right hemisphere 69.0
Principal sensory trigeminal nucleus
nTPM: 78.4
2367 Female, age 91, left hemisphere 93.9
2324 Male, age 76, both hemispheres 88.1
2008 Male, age 80, left hemisphere 67.5
2158 Male, age 61, both hemispheres 64.2
Reticular pontine nucleus, caudal
nTPM: 87.5
2457 Female, age 91, both hemispheres 91.3
2559 Male, age 74, both hemispheres 90.7
2092 Male, age 76, both hemispheres 88.4
2332 Male, age 80, right hemisphere 79.4
Reticular pontine nucleus, oral
nTPM: 89.2
2366 Female, age 91, both hemispheres 107.5
2167 Male, age 76, both hemispheres 91.1
1939 Male, age 80, both hemispheres 85.5
2012 Female, age 85, both hemispheres 82.9
2361 Male, age 74, both hemispheres 78.9
Reticulotegmental nucleus
nTPM: 75.5
2333 Male, age 80, both hemispheres 80.6
2322 Female, age 91, both hemispheres 79.0
2452 Male, age 74, both hemispheres 78.2
2325 Male, age 76, both hemispheres 64.3
Spinal trigeminal nucleus, caudal
nTPM: 85.1
2312 Male, age 61, both hemispheres 105.1
2308 Male, age 80, both hemispheres 94.2
2642 Male, age 74, both hemispheres 83.2
2447 Male, age 76, both hemispheres 77.5
2390 Female, age 91, both hemispheres 65.6
Spinal trigeminal nucleus, interpolar
nTPM: 65.5
2033 Male, age 80, both hemispheres 73.5
2389 Female, age 91, both hemispheres 69.5
2386 Female, age 85, both hemispheres 66.3
2066 Male, age 76, right hemisphere 60.8
2625 Male, age 61, both hemispheres 57.4
Spinal trigeminal nucleus, oral
nTPM: 76.9
2164 Male, age 80, both hemispheres 83.5
1978 Male, age 76, both hemispheres 82.7
2737 Female, age 85, both hemispheres 64.4
Spinal vestibular nucleus
nTPM: 80.8
2748 Male, age 76, both hemispheres 100.7
2384 Male, age 74, both hemispheres 88.8
2806 Female, age 85, both hemispheres 76.9
2780 Male, age 80, both hemispheres 74.6
2186 Female, age 91, both hemispheres 73.5
2796 Male, age 61, both hemispheres 70.1
Subcoeruleus area
nTPM: 79.8
2369 Female, age 85, left hemisphere 101.7
2089 Male, age 76, left hemisphere 92.6
2451 Male, age 74, both hemispheres 75.8
2323 Female, age 91, left hemisphere 66.1
1958 Male, age 80, both hemispheres 62.9
Superior olive
nTPM: 84.4
2020 Male, age 76, both hemispheres 92.7
2329 Male, age 80, right hemisphere 91.2
2561 Female, age 91, both hemispheres 89.4
2364 Male, age 74, right hemisphere 75.7
1875 Female, age 85, both hemispheres 72.8
Superior vestibular nucleus
nTPM: 68.7
2061 Male, age 76, both hemispheres 75.8
2015 Male, age 80, both hemispheres 68.8
2383 Male, age 74, both hemispheres 61.5
Ventral medullary reticular nucleus
nTPM: 103.0
2372 Male, age 61, both hemispheres 105.6
2060 Male, age 76, both hemispheres 100.4
Ventral periolivary nuclei
nTPM: 74.8
2023 Male, age 76, both hemispheres 90.8
2794 Female, age 91, left hemisphere 73.7
2165 Male, age 80, both hemispheres 70.7
2130 Female, age 85, both hemispheres 64.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 80.6
2118 Male, age 80, both hemispheres 94.7
2180 Male, age 61, both hemispheres 87.6
1986 Male, age 76, both hemispheres 80.4
2302 Female, age 91, both hemispheres 72.6
2741 Female, age 85, both hemispheres 67.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 83.1
2456 Female, age 91, both hemispheres 97.1
2359 Male, age 61, both hemispheres 88.5
1959 Male, age 76, both hemispheres 82.3
2840 Female, age 85, both hemispheres 80.5
2161 Male, age 80, both hemispheres 79.0
2449 Male, age 74, both hemispheres 71.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 80.9
FF:10165-103B3 76 years, female 82.8
FF:10182-103D2 60 years, female 78.9
Medulla oblongata
Scaled Tags Per Million: 60.7
FF:10038-101F2 18-64 years, mixed 79.2
FF:10155-103A2 76 years, female 66.2
FF:10174-103C3 60 years, female 36.8
Pons
Scaled Tags Per Million: 63.4
FF:10033-101E6 18-54 years, mixed 63.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 13.2
Samples: 4

Max nTPM: 15.8
Min nTPM: 8.0
Sample A Female 15.8
Sample B Female 8.0
Sample C Male 13.6
Sample D Male 15.5
Pons
nTPM: 7.3
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.9
Sample A Female 7.3
Sample B Female 5.9
Sample C Male 6.2
Sample D Male 9.6

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 8.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 8.6
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.6
Sample A Male 8.1
Sample B Male 9.4
Sample C Female 9.1
Sample D Female 7.6

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
71213755 Antisense, RP_050816_04_E10, Mouse strain C57BL/6J (56 days, male) 0.5
1265 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.4
1266 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.4
1265 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.5
71213755 Antisense, RP_050816_04_E10, Mouse strain C57BL/6J (56 days, male) 0.3
1266 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.1

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