HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.6 nTPM
HPA:49.6 nTPM
GTEx:45.0 nTPM
FANTOM5:87.4 Scaled Tags Per Million
Pig:33.3 nTPM
Mouse:35.1 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024076
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.6
Sample id Sample description nTPM
Hippocampus
nTPM: 48.4
1855 Male, age 76, left hemisphere 52.5
1898 Male, age 80, left hemisphere 50.7
2621 Female, age 67, right hemisphere 50.5
2529 Female, age 94, left hemisphere 49.4
2148 Female, age 91, left hemisphere 49.3
1911 Female, age 85, right hemisphere 38.0
Dentate gyrus
nTPM: 48.1
2530 Female, age 94, left hemisphere 60.1
2010 Male, age 76, both hemispheres 46.8
2528 Male, age 74, both hemispheres 46.6
2246 Female, age 85, both hemispheres 45.4
1927 Female, age 91, both hemispheres 45.0
2531 Female, age 67, both hemispheres 44.9
Entorhinal gyrus
nTPM: 49.6
2613 Female, age 94, left hemisphere 55.0
2764 Male, age 80, right hemisphere 51.2
1787 Male, age 76, left hemisphere 49.5
2117 Female, age 91, right hemisphere 47.8
1938 Female, age 85, left hemisphere 47.3
2686 Male, age 75, right hemisphere 46.6
Hippocampus, CA1
nTPM: 43.2
2749 Male, age 80, left hemisphere 52.0
2527 Male, age 74, both hemispheres 45.7
1873 Female, age 85, both hemispheres 44.9
2082 Female, age 91, right hemisphere 37.4
2045 Male, age 76, both hemispheres 36.0
Hippocampus, CA2
nTPM: 47.3
1963 Male, age 80, left hemisphere 57.4
1892 Male, age 76, both hemispheres 55.5
2437 Female, age 94, left hemisphere 51.2
1940 Female, age 85, left hemisphere 40.9
2113 Female, age 91, right hemisphere 39.6
2249 Male, age 74, both hemispheres 39.0
Hippocampus, CA3
nTPM: 47.3
2861 Female, age 67, both hemispheres 63.6
2620 Female, age 94, left hemisphere 52.6
2137 Male, age 80, left hemisphere 48.1
1867 Male, age 76, both hemispheres 42.1
1891 Female, age 85, both hemispheres 38.8
2436 Male, age 74, both hemispheres 38.5
Parahippocampal cortex
nTPM: 45.2
2692 Male, age 74, both hemispheres 54.4
2622 Female, age 67, right hemisphere 49.8
2532 Female, age 72, left hemisphere 49.3
2245 Female, age 91, both hemispheres 46.5
1990 Female, age 91, right hemisphere 44.8
2693 Female, age 94, both hemispheres 44.2
1850 Male, age 80, both hemispheres 44.0
1933 Female, age 85, both hemispheres 43.7
2018 Male, age 76, both hemispheres 39.1
2250 Female, age 67, right hemisphere 36.3
Perirhinal gyrus
nTPM: 43.6
2521 Female, age 94, right hemisphere 46.5
1794 Male, age 80, right hemisphere 46.0
1847 Female, age 91, left hemisphere 42.8
1841 Female, age 85, right hemisphere 41.8
2848 Male, age 76, right hemisphere 40.9
Subiculum
nTPM: 43.9
2619 Male, age 74, both hemispheres 50.7
1901 Male, age 80, both hemispheres 45.0
2042 Male, age 76, both hemispheres 43.8
2438 Female, age 94, left hemisphere 42.2
1977 Female, age 85, both hemispheres 42.0
2729 Female, age 91, right hemisphere 39.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.0
Samples: 197

Max nTPM: 84.0
Min nTPM: 18.7
Std nTPM: 10.1
Median nTPM: 44.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 84.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 80.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 73.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 69.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 68.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 67.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 65.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 64.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 62.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.4
FF:10153-102I9 76 years, female 96.4
FF:10169-103B7 60 years, female 78.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 33.2
Min nTPM: 20.8
Sample A Female 33.2
Sample B Female 27.5
Sample C Male 28.0
Sample D Male 20.8
Entorhinal cortex
nTPM: 33.3
Samples: 4

Max nTPM: 38.8
Min nTPM: 25.0
Sample A Female 38.8
Sample B Female 25.0
Sample C Male 35.1
Sample D Male 34.2
Subiculum
nTPM: 29.2
Samples: 4

Max nTPM: 36.9
Min nTPM: 21.1
Sample A Female 36.9
Sample B Female 21.1
Sample C Male 31.9
Sample D Male 26.7
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 44.0
Min nTPM: 17.9
Sample A Female 34.5
Sample B Female 17.9
Sample C Male 44.0
Sample D Male 32.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.1
Samples: 4

Max nTPM: 41.7
Min nTPM: 30.9
Sample A Male 32.7
Sample B Male 35.2
Sample C Female 30.9
Sample D Female 41.7
Hippocampal formation
nTPM: 28.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 28.9
Sample C Female 28.2
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
68745534 Antisense, RP_050210_02_B05, Mouse strain C57BL/6J (56 days, male) 3.6

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