HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:17.4 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:22.3 nTPM
Mouse:24.1 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB069425Antibody CAB080053Antibody CAB080065Antibody CAB080070Antibody CAB080081Antibody CAB080095Antibody CAB080097
Glial cells LowNot detectedLowNot detectedNot detectedHighNot detected
Neuronal cells MediumMediumLowHighLowMediumMedium















HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 17.0
1855 Male, age 76, left hemisphere 18.1
1898 Male, age 80, left hemisphere 18.0
2148 Female, age 91, left hemisphere 17.5
2621 Female, age 67, right hemisphere 17.3
1911 Female, age 85, right hemisphere 15.8
2529 Female, age 94, left hemisphere 15.6
Dentate gyrus
nTPM: 17.1
1927 Female, age 91, both hemispheres 19.4
2246 Female, age 85, both hemispheres 17.3
2530 Female, age 94, left hemisphere 16.7
2528 Male, age 74, both hemispheres 16.6
2531 Female, age 67, both hemispheres 16.6
2010 Male, age 76, both hemispheres 16.0
Entorhinal gyrus
nTPM: 17.6
2613 Female, age 94, left hemisphere 20.0
2764 Male, age 80, right hemisphere 18.5
1938 Female, age 85, left hemisphere 17.7
1787 Male, age 76, left hemisphere 17.5
2686 Male, age 75, right hemisphere 16.7
2117 Female, age 91, right hemisphere 15.2
Hippocampus, CA1
nTPM: 18.4
2749 Male, age 80, left hemisphere 24.9
1873 Female, age 85, both hemispheres 18.4
2527 Male, age 74, both hemispheres 17.8
2082 Female, age 91, right hemisphere 15.7
2045 Male, age 76, both hemispheres 15.0
Hippocampus, CA2
nTPM: 17.9
1963 Male, age 80, left hemisphere 21.2
1892 Male, age 76, both hemispheres 19.8
1940 Female, age 85, left hemisphere 17.5
2437 Female, age 94, left hemisphere 16.5
2249 Male, age 74, both hemispheres 16.4
2113 Female, age 91, right hemisphere 16.3
Hippocampus, CA3
nTPM: 17.8
2137 Male, age 80, left hemisphere 22.6
2436 Male, age 74, both hemispheres 17.4
2861 Female, age 67, both hemispheres 17.3
1867 Male, age 76, both hemispheres 16.6
2620 Female, age 94, left hemisphere 16.6
1891 Female, age 85, both hemispheres 16.2
Parahippocampal cortex
nTPM: 17.7
1850 Male, age 80, both hemispheres 19.0
2532 Female, age 72, left hemisphere 18.3
1933 Female, age 85, both hemispheres 18.0
2245 Female, age 91, both hemispheres 18.0
2622 Female, age 67, right hemisphere 17.9
2692 Male, age 74, both hemispheres 17.9
2693 Female, age 94, both hemispheres 17.9
2250 Female, age 67, right hemisphere 17.4
1990 Female, age 91, right hemisphere 17.2
2018 Male, age 76, both hemispheres 15.6
Perirhinal gyrus
nTPM: 19.7
2521 Female, age 94, right hemisphere 21.0
1847 Female, age 91, left hemisphere 20.8
1794 Male, age 80, right hemisphere 19.8
1841 Female, age 85, right hemisphere 18.6
2848 Male, age 76, right hemisphere 18.1
Subiculum
nTPM: 16.6
2438 Female, age 94, left hemisphere 18.3
1977 Female, age 85, both hemispheres 17.3
2619 Male, age 74, both hemispheres 17.3
1901 Male, age 80, both hemispheres 17.2
2729 Female, age 91, right hemisphere 16.0
2042 Male, age 76, both hemispheres 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 26.6
Min nTPM: 9.6
Std nTPM: 3.0
Median nTPM: 17.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 26.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 24.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 24.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 24.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 23.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 23.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 23.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 23.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 20.3
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 15.2
Sample A Female 24.0
Sample B Female 22.9
Sample C Male 21.1
Sample D Male 15.2
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.4
Sample A Female 24.7
Sample B Female 20.6
Sample C Male 23.5
Sample D Male 20.4
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 27.5
Min nTPM: 18.9
Sample A Female 27.5
Sample B Female 19.1
Sample C Male 22.3
Sample D Male 18.9
Ventral hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 28.8
Min nTPM: 16.1
Sample A Female 21.9
Sample B Female 16.1
Sample C Male 28.8
Sample D Male 22.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 30.3
Min nTPM: 20.7
Sample A Male 23.3
Sample B Male 22.1
Sample C Female 20.7
Sample D Female 30.3
Hippocampal formation
nTPM: 23.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 25.1
Sample C Female 27.0
Sample D Female 21.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68845741 Antisense, RP_050224_02_D09, Mouse strain C57BL/6J (56 days, male) 1.3

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