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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:285.0 nTPM
GTEx:285.0 nTPM
FANTOM5:63.6 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 285.0
GTEx sample id Sample description nTPM
Retina
Average nTPM: 285.0
Samples: 105

Max nTPM: 441.6
Min nTPM: 148.0
Std nTPM: 63.1
Median nTPM:
495_1 57 years, female 441.6
189_1 76 years, male 435.2
414_1 84 years, female 424.2
139_1 64 years, female 406.2
466_1 57 years, female 403.1
468_1 89 years, male 397.2
89_1 63 years, male 385.1
126_1 63 years, male 382.8
266_1 85 years, male 379.3
389_1 86 years, female 378.7
413_1 59 years, female 376.7
17_1 71 years, male 372.8
415_1 77 years, female 368.4
246_1 77 years, male 364.0
308_1 70 years, female 362.8
499_1 55 years, female 360.3
526_1 61 years, male 357.6
491_1 89 years, female 357.3
162_1 79 years, female 354.0
315_1 62 years, female 349.3
149_1 88 years, male 345.0
109_1 81 years, female 344.5
120_1 70 years, female 342.6
324_1 76 years, male 338.5
153_1 70 years, female 333.9
377_1 82 years, female 328.8
517_1 88 years, male 328.4
404_1 82 years, female 325.3
18_1 88 years, male 324.4
396_1 62 years, male 323.0
518_1 75 years, female 320.7
119_1 70 years, female 318.7
32_1 67 years, male 317.3
307_1 66 years, female 315.6
501_1 88 years, male 314.2
142_1 61 years, female 311.4
394_1 75 years, female 311.0
319_1 81 years, male 309.4
376_1 75 years, female 303.6
81_1 67 years, male 303.0
503_1 68 years, male 295.5
265_1 87 years, male 290.1
2_1 77 years, female 286.8
251_1 78 years, male 285.0
254_1 77 years, female 284.4
311_1 78 years, male 281.6
321_1 62 years, female 281.5
406_1 79 years, male 280.6
379_1 60 years, male 280.3
425_1 59 years, female 276.8
9_1 66 years, female 276.0
405_1 91 years, male 276.0
115_1 83 years, male 275.1
217_1 76 years, male 274.8
313_1 79 years, female 274.6
6_1 73 years, female 268.7
292_1 71 years, male 267.8
490_1 67 years, female 266.7
293_1 68 years, female 266.3
177_1 74 years, male 266.2
384_1 83 years, male 266.1
35_1 74 years, female 260.2
480_1 63 years, male 259.7
229_1 69 years, female 259.5
137_1 83 years, male 256.3
4_1 88 years, female 255.8
386_1 76 years, male 255.6
288_1 66 years, female 255.1
355_1 70 years, female 254.1
320_1 89 years, female 252.8
322_1 76 years, male 252.0
117_1 61 years, male 251.0
43_1 64 years, female 248.0
145_1 84 years, male 245.5
318_1 68 years, male 245.1
286_1 68 years, female 243.8
347_1 72 years, male 242.2
291_1 76 years, male 240.0
317_1 60 years, male 239.8
375_1 74 years, female 238.1
316_1 62 years, male 237.3
295_1 61 years, female 234.0
163_1 78 years, male 230.6
335_1 73 years, female 227.1
352_1 62 years, male 226.2
356_1 87 years, female 223.2
348_1 84 years, male 221.5
173_1 67 years, male 221.0
172_1 72 years, female 220.3
42_1 85 years, male 220.1
349_1 83 years, male 218.3
350_1 84 years, female 216.6
99_1 64 years, male 216.0
447_1 81 years, male 214.2
314_1 67 years, male 212.9
452_1 88 years, female 210.8
351_1 91 years, male 208.1
354_1 81 years, female 208.1
243_1 75 years, male 204.7
353_1 82 years, female 196.9
506_1 65 years, male 196.0
264_1 73 years, female 188.0
41_1 94 years, female 175.7
237_1 82 years, male 158.6
218_1 71 years, female 148.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 63.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 63.6
FF:10030-101E3 24-65 years, mixed 63.6

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