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HMGN2
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Ovarian stroma cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:394.6 nTPM
HPA:332.8 nTPM
GTEx:394.6 nTPM
FANTOM5:78.5 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB018371
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 332.8
overview
Female, age 64
Ovary sample 192
nTPM: 302.1
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 314
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 382.2
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5


OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 394.6
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 394.6
Samples: 180

Max nTPM: 776.2
Min nTPM: 130.9
Std nTPM: 111.9
Median nTPM: 384.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 776.2
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 651.5
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 643.0
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 631.9
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 626.0
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 621.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 613.4
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 608.4
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 607.4
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 601.0
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 592.0
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 591.6
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 589.3
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 586.0
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 574.7
GTEX-RU72-2226-SM-46MUE 50-59 years, female 567.9
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 559.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 546.1
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 546.0
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 538.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 533.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 531.2
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 530.4
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 524.4
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 524.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 522.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 521.7
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 519.3
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 514.5
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 512.9
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 506.4
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 502.4
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 500.7
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 499.6
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 491.3
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 489.6
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 484.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 484.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 480.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 474.2
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 467.5
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 463.9
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 463.9
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 461.0
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 459.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 458.0
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 457.4
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 456.5
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 456.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 454.3
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 453.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 453.1
GTEX-183WM-1926-SM-72D5F 70-79 years, female 453.0
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 451.2
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 450.3
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 447.9
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 441.7
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 441.5
GTEX-14PKV-1226-SM-6871T 20-29 years, female 441.1
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 440.9
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 439.0
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 437.9
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 435.5
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 431.3
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 431.2
GTEX-QCQG-1426-SM-48U22 50-59 years, female 430.6
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 429.9
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 429.6
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 428.4
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 427.5
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 419.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 419.2
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 419.2
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 410.3
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 410.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 410.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 409.8
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 408.9
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 405.1
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 403.5
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 399.7
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 399.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 396.7
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 396.4
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 392.9
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 388.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 387.8
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 387.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 387.2
GTEX-S32W-1226-SM-4AD67 50-59 years, female 384.8
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 383.5
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 381.3
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 375.8
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 374.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 369.4
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 367.5
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 367.3
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 366.9
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 366.3
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 365.7
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 365.7
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 365.1
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 362.9
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 360.5
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 358.0
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 357.0
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 355.3
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 355.3
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 354.7
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 351.2
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 350.5
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 346.2
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 346.0
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 343.3
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 340.7
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 340.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 338.7
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 338.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 334.6
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 333.9
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 333.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 332.4
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 331.9
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 329.5
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 328.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 324.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 324.5
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 324.2
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 318.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 318.2
GTEX-P78B-1926-SM-3P616 40-49 years, female 315.4
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 315.3
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 315.1
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 313.4
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 312.3
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 307.0
GTEX-18D9A-0826-SM-718C1 30-39 years, female 304.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 304.1
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 301.8
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 301.3
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 298.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 297.7
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 297.6
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 297.3
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 295.2
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 295.1
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 294.7
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 293.6
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 290.2
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 289.4
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 287.4
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 286.7
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 286.6
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 286.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 282.6
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 282.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 281.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 281.1
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 275.4
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 272.5
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 272.1
GTEX-R55G-1526-SM-48FER 40-49 years, female 271.9
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 263.6
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 261.0
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 260.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 247.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 246.0
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 242.2
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 237.3
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 236.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 231.9
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 222.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 221.7
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 211.2
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 204.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 199.4
GTEX-11I78-1926-SM-59878 50-59 years, female 198.9
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 197.4
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 179.8
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 130.9
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 78.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 78.5
FF:10020-101D2 47,75,84 years, female 78.5

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