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RPL39
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  • RPL39
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:867.0 nTPM
FANTOM5:28.3 Scaled Tags Per Million
Pig:182.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047105
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 867.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 867.0
Samples: 246

Max nTPM: 2277.5
Min nTPM: 411.0
Std nTPM: 280.2
Median nTPM: 814.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2277.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2054.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1985.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1807.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1803.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1681.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1601.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1577.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1508.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1488.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1476.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1473.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1442.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1405.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1317.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1284.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1281.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1274.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1266.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1248.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1248.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1242.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1238.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1233.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1224.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1202.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1179.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1176.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1116.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1112.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1112.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1106.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1100.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1084.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1080.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1072.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1068.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1060.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1060.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1057.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1055.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1049.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1037.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1037.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1033.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1031.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1031.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1028.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1027.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1024.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1007.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1004.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1002.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 999.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 999.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 997.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 997.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 996.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 991.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 990.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 984.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 984.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 981.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 976.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 976.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 973.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 955.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 954.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 953.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 951.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 948.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 946.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 944.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 942.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 941.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 940.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 936.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 930.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 929.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 927.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 927.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 924.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 923.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 920.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 913.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 909.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 907.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 902.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 898.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 898.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 896.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 895.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 893.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 883.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 882.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 881.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 881.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 880.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 878.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 874.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 873.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 871.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 871.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 869.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 868.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 864.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 864.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 861.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 861.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 856.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 852.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 851.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 843.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 840.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 839.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 837.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 835.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 832.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 827.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 826.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 823.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 818.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 815.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 814.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 812.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 811.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 794.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 790.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 787.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 786.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 782.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 782.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 781.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 778.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 777.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 777.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 776.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 776.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 775.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 775.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 770.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 769.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 768.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 765.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 765.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 761.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 760.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 760.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 759.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 758.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 752.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 751.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 751.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 751.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 750.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 748.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 747.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 745.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 730.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 729.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 722.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 721.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 721.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 720.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 718.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 716.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 715.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 714.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 711.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 711.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 710.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 708.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 708.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 707.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 706.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 706.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 704.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 703.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 701.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 700.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 692.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 691.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 687.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 687.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 679.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 675.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 673.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 672.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 667.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 662.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 658.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 656.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 653.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 652.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 648.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 646.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 646.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 646.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 646.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 641.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 638.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 636.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 635.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 634.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 630.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 626.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 625.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 624.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 619.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 614.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 612.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 611.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 607.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 604.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 603.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 598.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 597.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 595.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 595.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 595.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 594.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 592.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 590.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 590.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 587.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 586.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 580.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 580.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 572.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 568.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 565.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 563.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 561.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 551.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 548.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 523.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 520.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 518.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 513.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 509.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 497.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 494.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 481.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 479.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 449.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 411.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 28.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 28.3
FF:10164-103B2 76 years, female 28.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 182.5
Pig sample Sample description nTPM
Caudate
nTPM: 182.6
Samples: 4

Max nTPM: 201.2
Min nTPM: 167.8
Sample A Female 201.2
Sample B Female 184.3
Sample C Male 176.9
Sample D Male 167.8

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