HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.5 nTPM
HPA:8.5 nTPM
GTEx:36.4 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:60.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041189
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.5
Sample id Sample description nTPM
Hippocampus
nTPM: 7.4
1898 Male, age 80, left hemisphere 8.2
2621 Female, age 67, right hemisphere 7.8
1911 Female, age 85, right hemisphere 7.4
2148 Female, age 91, left hemisphere 7.0
2529 Female, age 94, left hemisphere 7.0
1855 Male, age 76, left hemisphere 6.8
Dentate gyrus
nTPM: 7.1
2010 Male, age 76, both hemispheres 7.8
1927 Female, age 91, both hemispheres 7.0
2530 Female, age 94, left hemisphere 7.0
2246 Female, age 85, both hemispheres 6.9
2528 Male, age 74, both hemispheres 6.9
2531 Female, age 67, both hemispheres 6.8
Entorhinal gyrus
nTPM: 7.2
1787 Male, age 76, left hemisphere 8.2
2686 Male, age 75, right hemisphere 7.1
2117 Female, age 91, right hemisphere 7.0
2613 Female, age 94, left hemisphere 7.0
1938 Female, age 85, left hemisphere 6.9
2764 Male, age 80, right hemisphere 6.9
Hippocampus, CA1
nTPM: 6.9
2082 Female, age 91, right hemisphere 7.0
1873 Female, age 85, both hemispheres 6.9
2527 Male, age 74, both hemispheres 6.9
2749 Male, age 80, left hemisphere 6.9
2045 Male, age 76, both hemispheres 6.8
Hippocampus, CA2
nTPM: 8.5
1940 Female, age 85, left hemisphere 13.8
1892 Male, age 76, both hemispheres 9.5
2113 Female, age 91, right hemisphere 7.0
2437 Female, age 94, left hemisphere 7.0
1963 Male, age 80, left hemisphere 6.9
2249 Male, age 74, both hemispheres 6.9
Hippocampus, CA3
nTPM: 7.5
1867 Male, age 76, both hemispheres 10.6
2620 Female, age 94, left hemisphere 7.0
1891 Female, age 85, both hemispheres 6.9
2137 Male, age 80, left hemisphere 6.9
2436 Male, age 74, both hemispheres 6.9
2861 Female, age 67, both hemispheres 6.8
Parahippocampal cortex
nTPM: 7.0
2018 Male, age 76, both hemispheres 8.0
1990 Female, age 91, right hemisphere 7.0
2245 Female, age 91, both hemispheres 7.0
2250 Female, age 67, right hemisphere 7.0
2693 Female, age 94, both hemispheres 7.0
1850 Male, age 80, both hemispheres 6.9
1933 Female, age 85, both hemispheres 6.9
2692 Male, age 74, both hemispheres 6.9
2532 Female, age 72, left hemisphere 6.8
2622 Female, age 67, right hemisphere 6.8
Perirhinal gyrus
nTPM: 7.0
2848 Male, age 76, right hemisphere 7.1
1847 Female, age 91, left hemisphere 7.0
2521 Female, age 94, right hemisphere 7.0
1794 Male, age 80, right hemisphere 6.9
1841 Female, age 85, right hemisphere 6.9
Subiculum
nTPM: 7.5
2042 Male, age 76, both hemispheres 10.1
2438 Female, age 94, left hemisphere 7.0
2729 Female, age 91, right hemisphere 7.0
1901 Male, age 80, both hemispheres 6.9
1977 Female, age 85, both hemispheres 6.9
2619 Male, age 74, both hemispheres 6.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 385.0
Min nTPM: 0.0
Std nTPM: 36.7
Median nTPM: 28.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 385.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 175.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 156.5
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 150.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 120.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 115.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 98.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 96.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 94.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 88.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 83.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.0
FF:10169-103B7 60 years, female 0.0
FF:10153-102I9 76 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 84.3
Min nTPM: 52.0
Sample A Female 84.3
Sample B Female 53.2
Sample C Male 52.0
Sample D Male 53.7
Entorhinal cortex
nTPM: 55.4
Samples: 4

Max nTPM: 64.6
Min nTPM: 46.7
Sample A Female 60.5
Sample B Female 64.6
Sample C Male 49.7
Sample D Male 46.7
Subiculum
nTPM: 45.4
Samples: 4

Max nTPM: 65.1
Min nTPM: 33.8
Sample A Female 65.1
Sample B Female 42.2
Sample C Male 33.8
Sample D Male 40.5
Ventral hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 63.3
Min nTPM: 45.1
Sample A Female 60.3
Sample B Female 45.1
Sample C Male 63.3
Sample D Male 46.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.