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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:88.4 nTPM
GTEx:88.4 nTPM
FANTOM5:38.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB010162Antibody CAB025656
Squamous epithelial cells MediumLow





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 88.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 88.4
Samples: 156

Max nTPM: 247.7
Min nTPM: 12.3
Std nTPM: 54.7
Median nTPM: 87.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 247.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 236.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 214.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 198.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 192.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 188.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 186.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 181.8
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 180.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 177.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 175.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 171.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 168.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 168.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 160.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 158.5
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 157.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 154.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 153.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 153.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 153.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 151.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 146.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 146.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 145.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 141.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 141.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 138.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 138.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 137.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 136.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 135.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 134.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 134.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 134.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 132.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 131.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 130.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 130.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 130.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 128.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 126.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 124.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 123.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 123.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 122.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 122.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 122.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 121.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 120.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 119.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 119.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 119.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 115.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 111.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 111.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 110.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 110.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 110.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 109.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 107.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 106.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 106.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 104.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 104.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 103.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 102.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 101.5
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 100.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 99.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 94.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 94.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 94.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 93.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 91.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 90.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 90.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 87.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 87.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 84.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 83.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 83.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 81.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 79.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 78.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 78.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 75.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 74.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 73.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 72.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 71.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 69.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 68.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 68.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 67.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 60.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 58.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 55.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 54.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 54.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 52.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 50.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 50.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 49.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 49.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 49.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 48.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 47.8
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 47.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 47.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 47.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 46.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 45.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 41.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 41.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 41.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 40.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 40.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 39.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 37.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 35.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 34.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 31.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 28.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 28.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 26.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 25.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 25.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 24.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 23.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 22.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 21.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 21.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 21.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 21.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 20.9
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 20.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 20.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 19.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 19.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 18.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 18.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 18.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 18.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 17.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 16.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 16.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 16.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 16.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 16.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 15.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 15.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 14.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 13.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 13.7
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 12.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 38.9
FF:10204-103F6 68 years, female 38.9

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