HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:6.8 nTPM
HPA:6.8 nTPM
GTEx:242.7 nTPM
FANTOM5:170.5 Scaled Tags Per Million
Pig:72.6 nTPM
Mouse:188.5 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021873
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 6.8
Sample id Sample description nTPM
Hippocampus
nTPM: 4.3
1898 Male, age 80, left hemisphere 6.5
1911 Female, age 85, right hemisphere 5.5
2621 Female, age 67, right hemisphere 4.6
2529 Female, age 94, left hemisphere 4.0
2148 Female, age 91, left hemisphere 3.1
1855 Male, age 76, left hemisphere 2.3
Dentate gyrus
nTPM: 4.0
2010 Male, age 76, both hemispheres 4.8
2528 Male, age 74, both hemispheres 4.5
2246 Female, age 85, both hemispheres 4.0
2530 Female, age 94, left hemisphere 4.0
1927 Female, age 91, both hemispheres 3.8
2531 Female, age 67, both hemispheres 3.2
Entorhinal gyrus
nTPM: 4.9
2117 Female, age 91, right hemisphere 6.1
2764 Male, age 80, right hemisphere 5.9
1787 Male, age 76, left hemisphere 5.1
1938 Female, age 85, left hemisphere 4.7
2613 Female, age 94, left hemisphere 4.0
2686 Male, age 75, right hemisphere 3.9
Hippocampus, CA1
nTPM: 4.2
2082 Female, age 91, right hemisphere 5.2
1873 Female, age 85, both hemispheres 4.7
2749 Male, age 80, left hemisphere 4.3
2527 Male, age 74, both hemispheres 3.6
2045 Male, age 76, both hemispheres 3.0
Hippocampus, CA2
nTPM: 5.8
1963 Male, age 80, left hemisphere 9.7
2113 Female, age 91, right hemisphere 6.2
2437 Female, age 94, left hemisphere 5.5
1940 Female, age 85, left hemisphere 5.1
2249 Male, age 74, both hemispheres 5.0
1892 Male, age 76, both hemispheres 3.4
Hippocampus, CA3
nTPM: 4.5
1891 Female, age 85, both hemispheres 8.3
2137 Male, age 80, left hemisphere 5.0
2620 Female, age 94, left hemisphere 4.0
1867 Male, age 76, both hemispheres 3.7
2436 Male, age 74, both hemispheres 3.4
2861 Female, age 67, both hemispheres 2.9
Parahippocampal cortex
nTPM: 4.0
1850 Male, age 80, both hemispheres 6.9
2532 Female, age 72, left hemisphere 6.1
2692 Male, age 74, both hemispheres 4.5
2693 Female, age 94, both hemispheres 4.0
2018 Male, age 76, both hemispheres 3.9
2245 Female, age 91, both hemispheres 3.3
1990 Female, age 91, right hemisphere 3.2
1933 Female, age 85, both hemispheres 2.9
2250 Female, age 67, right hemisphere 2.9
2622 Female, age 67, right hemisphere 2.9
Perirhinal gyrus
nTPM: 3.4
2521 Female, age 94, right hemisphere 4.0
1847 Female, age 91, left hemisphere 3.8
2848 Male, age 76, right hemisphere 3.4
1841 Female, age 85, right hemisphere 3.1
1794 Male, age 80, right hemisphere 2.8
Subiculum
nTPM: 6.8
1901 Male, age 80, both hemispheres 11.0
2042 Male, age 76, both hemispheres 10.4
2729 Female, age 91, right hemisphere 5.7
1977 Female, age 85, both hemispheres 5.5
2619 Male, age 74, both hemispheres 4.3
2438 Female, age 94, left hemisphere 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 242.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 242.7
Samples: 197

Max nTPM: 940.3
Min nTPM: 16.6
Std nTPM: 158.5
Median nTPM: 203.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 940.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 787.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 689.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 674.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 630.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 608.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 577.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 555.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 545.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 537.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 495.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 170.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 170.5
FF:10153-102I9 76 years, female 209.3
FF:10169-103B7 60 years, female 131.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.6
Samples: 4

Max nTPM: 109.6
Min nTPM: 22.6
Sample A Female 102.5
Sample B Female 55.7
Sample C Male 109.6
Sample D Male 22.6
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 33.2
Min nTPM: 16.3
Sample A Female 16.6
Sample B Female 33.2
Sample C Male 16.3
Sample D Male 30.3
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 39.0
Min nTPM: 24.7
Sample A Female 25.9
Sample B Female 39.0
Sample C Male 24.7
Sample D Male 29.8
Ventral hippocampus
nTPM: 47.4
Samples: 4

Max nTPM: 71.7
Min nTPM: 25.9
Sample A Female 50.9
Sample B Female 25.9
Sample C Male 40.9
Sample D Male 71.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 188.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.9
Samples: 4

Max nTPM: 128.3
Min nTPM: 36.3
Sample A Male 128.3
Sample B Male 86.3
Sample C Female 96.8
Sample D Female 36.3
Hippocampal formation
nTPM: 188.5
Samples: 4

Max nTPM: 287.0
Min nTPM: 126.8
Sample A Male 126.8
Sample B Male 144.7
Sample C Female 287.0
Sample D Female 195.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
70946633 Antisense, RP_050505_01_F05, Mouse strain C57BL/6J (56 days, male) 4.3

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