PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:312.3 nTPM
HPA:312.3 nTPM
FANTOM5:92.3 Scaled Tags Per Million
Pig:83.7 nTPM
Mouse:135.0 nTPM
Allen mouse:9.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 312.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 192.6
2301 Female, age 85, both hemispheres 353.4
2188 Female, age 91, both hemispheres 210.9
2090 Male, age 80, both hemispheres 133.6
1984 Male, age 76, both hemispheres 72.5
Area postrema
nTPM: 105.4
2306 Male, age 80, both hemispheres 172.0
2799 Male, age 61, both hemispheres 102.1
2054 Male, age 76, both hemispheres 42.2
Cuneate nuclei
nTPM: 168.4
2381 Male, age 80, both hemispheres 183.3
2376 Male, age 61, both hemispheres 182.0
2131 Male, age 76, both hemispheres 140.0
Dorsal cochlear nucleus
nTPM: 128.1
2187 Female, age 91, both hemispheres 161.3
2378 Male, age 80, both hemispheres 152.1
2370 Male, age 61, both hemispheres 144.3
2802 Male, age 74, right hemisphere 114.0
2058 Male, age 76, both hemispheres 68.8
Dorsal medullary reticular nucleus
nTPM: 183.1
2373 Male, age 61, both hemispheres 234.3
2088 Male, age 76, both hemispheres 166.0
2040 Female, age 85, both hemispheres 148.9
Dorsal motor vagal complex
nTPM: 109.6
2185 Male, age 76, both hemispheres 184.0
2797 Male, age 61, both hemispheres 136.0
2000 Male, age 74, unknown 127.2
2133 Female, age 91, both hemispheres 109.0
2643 Male, age 74, both hemispheres 91.9
2844 Male, age 55, unknown 88.8
2807 Female, age 85, both hemispheres 86.1
2813 Female, age 72, unknown 54.1
Dorsal tegmental nucleus
nTPM: 137.7
2083 Male, age 80, both hemispheres 229.8
2326 Male, age 74, both hemispheres 138.6
1936 Male, age 76, left hemisphere 115.1
2358 Male, age 61, both hemispheres 67.1
Dorsolateral tegmental area
nTPM: 164.3
2337 Male, age 61, both hemispheres 263.2
2654 Male, age 80, both hemispheres 229.0
2751 Female, age 85, both hemispheres 194.1
2360 Male, age 74, both hemispheres 77.9
2141 Male, age 76, both hemispheres 57.5
Gigantocellular reticular nuclei, medullary
nTPM: 156.4
2314 Male, age 61, both hemispheres 297.6
2310 Male, age 80, both hemispheres 163.8
2387 Female, age 91, both hemispheres 161.5
1876 Female, age 85, both hemispheres 149.6
2022 Male, age 76, right hemisphere 111.2
2462 Male, age 74, both hemispheres 54.9
Gigantocellular reticular nuclei, pars
nTPM: 170.1
2336 Male, age 61, both hemispheres 225.0
2330 Male, age 80, both hemispheres 178.0
2706 Male, age 80, both hemispheres 174.6
2084 Female, age 85, both hemispheres 153.7
2168 Male, age 76, both hemispheres 119.2
Inferior olive
nTPM: 194.9
2178 Male, age 61, both hemispheres 282.4
2628 Female, age 91, both hemispheres 193.3
2085 Female, age 85, both hemispheres 184.8
2563 Male, age 74, both hemispheres 166.3
2379 Male, age 80, both hemispheres 147.7
Kolliker-Fuse nucleus
nTPM: 161.3
2793 Female, age 91, left hemisphere 282.3
2163 Male, age 80, both hemispheres 150.5
2315 Male, age 76, right hemisphere 51.2
Lateral lemniscal nuclei
nTPM: 171.8
2320 Female, age 91, left hemisphere 276.8
2036 Male, age 80, both hemispheres 176.9
2746 Female, age 85, left hemisphere 175.3
2169 Male, age 76, both hemispheres 125.8
2453 Male, age 74, right hemisphere 104.3
Lateral medullary reticular nucleus
nTPM: 202.1
2852 Male, age 80, both hemispheres 284.6
2374 Male, age 61, both hemispheres 247.7
2305 Male, age 74, both hemispheres 220.1
2190 Female, age 85, both hemispheres 203.6
2044 Male, age 76, both hemispheres 148.1
2804 Female, age 91, both hemispheres 108.3
Lateral parabrachial nucleus
nTPM: 176.6
2792 Male, age 76, both hemispheres 256.3
2013 Male, age 80, both hemispheres 169.5
2790 Male, age 61, both hemispheres 168.5
2139 Female, age 85, right hemisphere 112.1
Lateral vestibular nucleus
nTPM: 173.0
2311 Male, age 80, both hemispheres 204.3
2184 Male, age 76, both hemispheres 141.7
Locus coeruleus
nTPM: 43.7
2162 Male, age 80, both hemispheres 86.3
2720 Male, age 74, both hemispheres 56.1
2317 Female, age 72, unknown 54.7
2123 Female, age 91, both hemispheres 42.4
2014 Male, age 55, unknown 35.9
1980 Male, age 76, both hemispheres 30.8
2788 Male, age 74, unknown 0.0
Medial olivary nucleus
nTPM: 199.0
1943 Male, age 61, both hemispheres 333.7
1962 Male, age 76, both hemispheres 243.2
2851 Male, age 80, both hemispheres 162.7
2138 Female, age 91, both hemispheres 56.4
Medial parabrachial nucleus
nTPM: 176.0
2463 Female, age 85, right hemisphere 209.4
2156 Male, age 61, both hemispheres 191.7
2170 Female, age 91, both hemispheres 191.4
2786 Male, age 76, both hemispheres 146.3
2854 Male, age 80, both hemispheres 141.2
Medial periolivary nuclei
nTPM: 123.1
2458 Female, age 91, both hemispheres 174.7
2081 Male, age 80, both hemispheres 154.0
2063 Male, age 76, both hemispheres 106.6
2791 Male, age 74, right hemisphere 93.9
2171 Female, age 85, both hemispheres 86.4
Medial vestibular nucleus
nTPM: 143.3
2093 Male, age 80, both hemispheres 211.3
2624 Male, age 61, both hemispheres 166.6
2801 Male, age 74, both hemispheres 163.2
2803 Female, age 91, both hemispheres 146.0
2743 Female, age 85, both hemispheres 115.3
2134 Male, age 76, both hemispheres 57.5
Motor facial nucleus
nTPM: 150.4
2126 Male, age 61, both hemispheres 226.8
2697 Female, age 85, both hemispheres 219.0
2365 Male, age 74, right hemisphere 123.1
2327 Male, age 80, both hemispheres 116.0
2795 Female, age 91, both hemispheres 113.8
2062 Male, age 76, both hemispheres 103.9
Motor hypoglossal nucleus
nTPM: 170.4
2182 Male, age 80, both hemispheres 298.0
2132 Female, age 85, both hemispheres 231.7
2125 Female, age 91, both hemispheres 223.5
2461 Male, age 61, both hemispheres 57.5
2277 Male, age 76, both hemispheres 41.4
Motor trigeminal nucleus
nTPM: 168.0
2321 Female, age 91, both hemispheres 221.7
2560 Male, age 74, both hemispheres 177.0
2309 Male, age 76, both hemispheres 156.3
2335 Male, age 61, both hemispheres 151.2
2079 Male, age 80, both hemispheres 133.7
Nuclei of the trapezoid body
nTPM: 139.4
2166 Male, age 80, both hemispheres 210.4
2159 Male, age 61, both hemispheres 171.3
2368 Female, age 91, both hemispheres 152.9
1983 Male, age 76, both hemispheres 101.3
2735 Female, age 85, both hemispheres 61.0
Nucleus ambiguus
nTPM: 312.3
2096 Female, age 85, both hemispheres 409.7
2071 Male, age 76, both hemispheres 215.0
Nucleus cuneatus
nTPM: 178.2
2380 Male, age 80, both hemispheres 214.5
2100 Male, age 76, both hemispheres 211.3
2808 Female, age 85, both hemispheres 179.9
2562 Male, age 61, both hemispheres 163.3
2564 Male, age 74, both hemispheres 150.1
2805 Female, age 91, both hemispheres 150.0
Nucleus gracilis
nTPM: 185.7
2382 Male, age 80, both hemispheres 216.1
2299 Female, age 85, both hemispheres 199.5
2627 Male, age 74, both hemispheres 141.7
Nucleus raphe magnus
nTPM: 115.5
2328 Male, age 80, both hemispheres 190.6
2459 Female, age 91, both hemispheres 158.4
2051 Male, age 76, both hemispheres 140.4
2455 Male, age 74, both hemispheres 110.8
2160 Male, age 61, both hemispheres 52.3
2172 Female, age 85, both hemispheres 40.9
Nucleus raphe obscurus
nTPM: 251.9
2845 Female, age 85, midline 293.5
2142 Male, age 76, midline 252.4
2800 Male, age 61, midline 209.7
Nucleus raphe pallidus
nTPM: 219.5
1924 Male, age 61, midline 254.8
2145 Male, age 76, midline 221.6
2183 Male, age 80, midline 182.0
Nucleus tractus solitarii
nTPM: 36.5
2307 Male, age 80, both hemispheres 63.1
2656 Male, age 76, both hemispheres 41.5
2191 Female, age 85, both hemispheres 39.0
2144 Female, age 91, right hemisphere 2.2
Paramedian reticular nucleus
nTPM: 123.4
2057 Male, age 80, both hemispheres 165.0
2313 Male, age 61, both hemispheres 136.0
2050 Female, age 85, both hemispheres 98.6
2052 Male, age 76, both hemispheres 94.0
Parvicellular reticular nuclei
nTPM: 143.8
2119 Male, age 80, both hemispheres 156.3
2095 Male, age 76, both hemispheres 145.5
2558 Male, age 74, both hemispheres 129.6
Parvicellular reticular nuclei, medullary
nTPM: 132.0
2189 Female, age 91, both hemispheres 151.0
2091 Female, age 85, both hemispheres 132.5
2181 Male, age 80, left hemisphere 112.6
Peritrigeminal nucleus
nTPM: 190.1
2179 Male, age 61, both hemispheres 213.3
2067 Female, age 85, both hemispheres 197.3
2136 Male, age 76, both hemispheres 159.6
Pontine nuclei
nTPM: 175.9
2319 Female, age 91, both hemispheres 218.4
2109 Female, age 72, unknown 214.0
2454 Male, age 74, left hemisphere 211.9
2115 Male, age 80, left hemisphere 202.8
1968 Male, age 76, left hemisphere 201.5
1863 Male, age 55, unknown 144.7
2787 Female, age 85, both hemispheres 109.6
2727 Male, age 61, right hemisphere 104.7
Pontine raphe nucleus
nTPM: 65.4
2853 Male, age 76, midline 92.1
2122 Female, age 85, midline 38.7
Posteroventral cochlear nucleus
nTPM: 176.4
2135 Female, age 91, both hemispheres 232.1
2070 Male, age 76, both hemispheres 209.6
2371 Male, age 61, both hemispheres 179.3
2341 Male, age 80, both hemispheres 174.2
2752 Female, age 85, both hemispheres 86.8
Prepositus hypoglossal nucleus
nTPM: 133.7
2855 Female, age 85, right hemisphere 159.1
2086 Male, age 80, both hemispheres 108.3
Principal sensory trigeminal nucleus
nTPM: 130.3
2367 Female, age 91, left hemisphere 173.5
2324 Male, age 76, both hemispheres 156.4
2008 Male, age 80, left hemisphere 97.5
2158 Male, age 61, both hemispheres 93.8
Reticular pontine nucleus, caudal
nTPM: 189.3
2559 Male, age 74, both hemispheres 213.7
2092 Male, age 76, both hemispheres 201.1
2457 Female, age 91, both hemispheres 193.5
2332 Male, age 80, right hemisphere 148.7
Reticular pontine nucleus, oral
nTPM: 170.6
2366 Female, age 91, both hemispheres 236.6
1939 Male, age 80, both hemispheres 204.9
2167 Male, age 76, both hemispheres 172.6
2012 Female, age 85, both hemispheres 122.5
2361 Male, age 74, both hemispheres 116.5
Reticulotegmental nucleus
nTPM: 141.8
2452 Male, age 74, both hemispheres 172.1
2333 Male, age 80, both hemispheres 170.5
2322 Female, age 91, both hemispheres 147.4
2325 Male, age 76, both hemispheres 77.3
Spinal trigeminal nucleus, caudal
nTPM: 196.0
2312 Male, age 61, both hemispheres 297.6
2308 Male, age 80, both hemispheres 236.1
2447 Male, age 76, both hemispheres 183.5
2390 Female, age 91, both hemispheres 131.7
2642 Male, age 74, both hemispheres 131.2
Spinal trigeminal nucleus, interpolar
nTPM: 94.9
2033 Male, age 80, both hemispheres 137.2
2389 Female, age 91, both hemispheres 108.9
2386 Female, age 85, both hemispheres 101.2
2625 Male, age 61, both hemispheres 85.5
2066 Male, age 76, right hemisphere 41.6
Spinal trigeminal nucleus, oral
nTPM: 137.1
2164 Male, age 80, both hemispheres 161.2
1978 Male, age 76, both hemispheres 157.3
2737 Female, age 85, both hemispheres 92.8
Spinal vestibular nucleus
nTPM: 192.6
2748 Male, age 76, both hemispheres 279.7
2384 Male, age 74, both hemispheres 203.2
2780 Male, age 80, both hemispheres 179.5
2186 Female, age 91, both hemispheres 178.3
2806 Female, age 85, both hemispheres 175.6
2796 Male, age 61, both hemispheres 139.5
Subcoeruleus area
nTPM: 140.6
2369 Female, age 85, left hemisphere 213.6
2089 Male, age 76, left hemisphere 138.3
2451 Male, age 74, both hemispheres 128.1
1958 Male, age 80, both hemispheres 115.7
2323 Female, age 91, left hemisphere 107.4
Superior olive
nTPM: 169.4
2329 Male, age 80, right hemisphere 222.0
2020 Male, age 76, both hemispheres 214.4
2561 Female, age 91, both hemispheres 176.9
2364 Male, age 74, right hemisphere 122.0
1875 Female, age 85, both hemispheres 111.6
Superior vestibular nucleus
nTPM: 105.8
2015 Male, age 80, both hemispheres 148.2
2061 Male, age 76, both hemispheres 127.9
2383 Male, age 74, both hemispheres 41.5
Ventral medullary reticular nucleus
nTPM: 229.3
2372 Male, age 61, both hemispheres 231.7
2060 Male, age 76, both hemispheres 227.0
Ventral periolivary nuclei
nTPM: 122.4
2023 Male, age 76, both hemispheres 234.7
2165 Male, age 80, both hemispheres 131.1
2794 Female, age 91, left hemisphere 98.4
2130 Female, age 85, both hemispheres 25.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 178.3
2118 Male, age 80, both hemispheres 233.5
2180 Male, age 61, both hemispheres 210.0
2741 Female, age 85, both hemispheres 165.8
2302 Female, age 91, both hemispheres 141.3
1986 Male, age 76, both hemispheres 140.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 153.2
2456 Female, age 91, both hemispheres 218.8
1959 Male, age 76, both hemispheres 162.0
2161 Male, age 80, both hemispheres 152.2
2359 Male, age 61, both hemispheres 145.4
2840 Female, age 85, both hemispheres 122.1
2449 Male, age 74, both hemispheres 118.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 92.3
FF:10165-103B3 76 years, female 92.3
FF:10182-103D2 60 years, female 92.2
Medulla oblongata
Scaled Tags Per Million: 68.3
FF:10038-101F2 18-64 years, mixed 82.7
FF:10174-103C3 60 years, female 62.2
FF:10155-103A2 76 years, female 60.2
Pons
Scaled Tags Per Million: 74.1
FF:10033-101E6 18-54 years, mixed 74.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 83.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 83.7
Samples: 4

Max nTPM: 98.9
Min nTPM: 64.2
Sample A Female 81.1
Sample B Female 64.2
Sample C Male 90.7
Sample D Male 98.9
Pons
nTPM: 54.0
Samples: 4

Max nTPM: 86.8
Min nTPM: 39.6
Sample A Female 39.7
Sample B Female 39.6
Sample C Male 50.0
Sample D Male 86.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 135.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 135.0
Samples: 4

Max nTPM: 150.4
Min nTPM: 128.7
Sample A Male 129.6
Sample B Male 131.1
Sample C Female 128.7
Sample D Female 150.4

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.0
69447978 Antisense, RP_050419_02_D12, Mouse strain C57BL/6J (56 days, male) 9.0
Pons
Expression energy: 8.2
69447978 Antisense, RP_050419_02_D12, Mouse strain C57BL/6J (56 days, male) 8.2

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