HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:3319.4 nTPM
HPA:3319.4 nTPM
GTEx:4241.2 nTPM
FANTOM5:29.3 Scaled Tags Per Million
Pig:1201.3 nTPM
Mouse:3334.4 nTPM
Allen mouse:29.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033806
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 3319.4
Sample id Sample description nTPM
Hippocampus
nTPM: 3192.7
1898 Male, age 80, left hemisphere 3396.7
1855 Male, age 76, left hemisphere 3391.6
2621 Female, age 67, right hemisphere 3176.1
1911 Female, age 85, right hemisphere 3143.6
2529 Female, age 94, left hemisphere 3127.9
2148 Female, age 91, left hemisphere 2920.4
Dentate gyrus
nTPM: 3196.9
2010 Male, age 76, both hemispheres 3537.0
2530 Female, age 94, left hemisphere 3489.7
1927 Female, age 91, both hemispheres 3160.8
2246 Female, age 85, both hemispheres 3029.2
2531 Female, age 67, both hemispheres 3028.2
2528 Male, age 74, both hemispheres 2936.3
Entorhinal gyrus
nTPM: 3166.4
1787 Male, age 76, left hemisphere 3356.6
2764 Male, age 80, right hemisphere 3186.7
1938 Female, age 85, left hemisphere 3175.9
2686 Male, age 75, right hemisphere 3151.8
2117 Female, age 91, right hemisphere 3096.9
2613 Female, age 94, left hemisphere 3030.5
Hippocampus, CA1
nTPM: 3319.4
2749 Male, age 80, left hemisphere 4238.1
1873 Female, age 85, both hemispheres 3260.2
2045 Male, age 76, both hemispheres 3150.4
2082 Female, age 91, right hemisphere 3014.1
2527 Male, age 74, both hemispheres 2934.4
Hippocampus, CA2
nTPM: 3294.2
1963 Male, age 80, left hemisphere 3724.0
1892 Male, age 76, both hemispheres 3671.7
1940 Female, age 85, left hemisphere 3180.2
2437 Female, age 94, left hemisphere 3163.7
2113 Female, age 91, right hemisphere 3021.9
2249 Male, age 74, both hemispheres 3003.7
Hippocampus, CA3
nTPM: 3181.6
2137 Male, age 80, left hemisphere 3684.1
1867 Male, age 76, both hemispheres 3606.3
1891 Female, age 85, both hemispheres 3113.0
2861 Female, age 67, both hemispheres 2969.6
2620 Female, age 94, left hemisphere 2863.2
2436 Male, age 74, both hemispheres 2853.8
Parahippocampal cortex
nTPM: 3089.3
2018 Male, age 76, both hemispheres 3499.0
1850 Male, age 80, both hemispheres 3184.5
1933 Female, age 85, both hemispheres 3125.6
2532 Female, age 72, left hemisphere 3083.2
1990 Female, age 91, right hemisphere 3060.4
2245 Female, age 91, both hemispheres 3057.2
2250 Female, age 67, right hemisphere 3025.0
2692 Male, age 74, both hemispheres 2993.1
2693 Female, age 94, both hemispheres 2966.0
2622 Female, age 67, right hemisphere 2898.9
Perirhinal gyrus
nTPM: 3188.0
2848 Male, age 76, right hemisphere 3314.5
1794 Male, age 80, right hemisphere 3293.4
1847 Female, age 91, left hemisphere 3158.8
1841 Female, age 85, right hemisphere 3143.2
2521 Female, age 94, right hemisphere 3030.0
Subiculum
nTPM: 3211.3
2042 Male, age 76, both hemispheres 3634.8
1901 Male, age 80, both hemispheres 3404.3
1977 Female, age 85, both hemispheres 3221.7
2438 Female, age 94, left hemisphere 3082.8
2729 Female, age 91, right hemisphere 2988.6
2619 Male, age 74, both hemispheres 2935.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4241.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4241.2
Samples: 197

Max nTPM: 9378.0
Min nTPM: 1708.4
Std nTPM: 1338.1
Median nTPM: 4116.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 9378.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 9290.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 8410.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 7449.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 7308.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 7231.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7227.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 7068.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 7043.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 6755.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 6591.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.3
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1201.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1201.3
Samples: 4

Max nTPM: 1889.8
Min nTPM: 708.7
Sample A Female 1889.8
Sample B Female 1183.7
Sample C Male 1023.1
Sample D Male 708.7
Entorhinal cortex
nTPM: 659.8
Samples: 4

Max nTPM: 872.2
Min nTPM: 436.4
Sample A Female 646.0
Sample B Female 872.2
Sample C Male 684.4
Sample D Male 436.4
Subiculum
nTPM: 828.9
Samples: 4

Max nTPM: 1231.3
Min nTPM: 576.9
Sample A Female 1231.3
Sample B Female 875.2
Sample C Male 576.9
Sample D Male 632.3
Ventral hippocampus
nTPM: 861.9
Samples: 4

Max nTPM: 1051.5
Min nTPM: 697.0
Sample A Female 930.2
Sample B Female 768.9
Sample C Male 697.0
Sample D Male 1051.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3334.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2059.0
Samples: 4

Max nTPM: 2544.9
Min nTPM: 1874.9
Sample A Male 1903.7
Sample B Male 1912.3
Sample C Female 2544.9
Sample D Female 1874.9
Hippocampal formation
nTPM: 3334.4
Samples: 4

Max nTPM: 3673.7
Min nTPM: 2925.5
Sample A Male 3673.7
Sample B Male 3166.9
Sample C Female 3571.5
Sample D Female 2925.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 29.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 29.0
77792010 Antisense, RP_070208_04_C12, Mouse strain C57BL/6J (56 days, male) 29.3
512993 Antisense, RP_040809_02_F11, Mouse strain C57BL/6J (56 days, male) 28.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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