HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.2 nTPM
HPA:68.2 nTPM
GTEx:43.9 nTPM
FANTOM5:48.9 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:9.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB069456
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.2
Sample id Sample description nTPM
Hippocampus
nTPM: 52.5
1898 Male, age 80, left hemisphere 57.9
2621 Female, age 67, right hemisphere 54.2
2529 Female, age 94, left hemisphere 53.1
1855 Male, age 76, left hemisphere 52.2
2148 Female, age 91, left hemisphere 50.0
1911 Female, age 85, right hemisphere 47.7
Dentate gyrus
nTPM: 55.0
2010 Male, age 76, both hemispheres 61.2
2530 Female, age 94, left hemisphere 57.3
2531 Female, age 67, both hemispheres 56.9
2528 Male, age 74, both hemispheres 56.5
1927 Female, age 91, both hemispheres 50.0
2246 Female, age 85, both hemispheres 47.9
Entorhinal gyrus
nTPM: 50.6
1787 Male, age 76, left hemisphere 53.5
2686 Male, age 75, right hemisphere 51.7
2764 Male, age 80, right hemisphere 51.1
2613 Female, age 94, left hemisphere 50.6
2117 Female, age 91, right hemisphere 49.9
1938 Female, age 85, left hemisphere 46.9
Hippocampus, CA1
nTPM: 51.7
2527 Male, age 74, both hemispheres 54.7
2045 Male, age 76, both hemispheres 52.2
2749 Male, age 80, left hemisphere 51.7
2082 Female, age 91, right hemisphere 50.2
1873 Female, age 85, both hemispheres 49.4
Hippocampus, CA2
nTPM: 56.5
2249 Male, age 74, both hemispheres 73.3
2437 Female, age 94, left hemisphere 58.0
1892 Male, age 76, both hemispheres 57.2
1963 Male, age 80, left hemisphere 53.2
2113 Female, age 91, right hemisphere 51.2
1940 Female, age 85, left hemisphere 46.1
Hippocampus, CA3
nTPM: 68.2
2436 Male, age 74, both hemispheres 141.2
1867 Male, age 76, both hemispheres 58.2
2861 Female, age 67, both hemispheres 57.7
2620 Female, age 94, left hemisphere 51.7
1891 Female, age 85, both hemispheres 50.6
2137 Male, age 80, left hemisphere 49.5
Parahippocampal cortex
nTPM: 52.3
1990 Female, age 91, right hemisphere 55.3
2018 Male, age 76, both hemispheres 54.9
2245 Female, age 91, both hemispheres 53.6
2250 Female, age 67, right hemisphere 52.7
2692 Male, age 74, both hemispheres 52.5
2693 Female, age 94, both hemispheres 51.9
2622 Female, age 67, right hemisphere 51.6
1850 Male, age 80, both hemispheres 51.1
2532 Female, age 72, left hemisphere 50.5
1933 Female, age 85, both hemispheres 48.4
Perirhinal gyrus
nTPM: 51.8
2521 Female, age 94, right hemisphere 58.4
1794 Male, age 80, right hemisphere 53.5
1841 Female, age 85, right hemisphere 51.1
1847 Female, age 91, left hemisphere 49.8
2848 Male, age 76, right hemisphere 46.5
Subiculum
nTPM: 53.8
2438 Female, age 94, left hemisphere 60.4
1901 Male, age 80, both hemispheres 54.6
2042 Male, age 76, both hemispheres 54.5
2619 Male, age 74, both hemispheres 53.2
2729 Female, age 91, right hemisphere 51.6
1977 Female, age 85, both hemispheres 48.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.9
Samples: 197

Max nTPM: 730.3
Min nTPM: 8.1
Std nTPM: 57.2
Median nTPM: 31.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 730.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 220.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 171.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 165.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 144.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 131.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 120.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 115.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 115.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 99.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 97.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.9
FF:10153-102I9 76 years, female 63.4
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 5.4
Sample A Female 12.1
Sample B Female 10.7
Sample C Male 5.4
Sample D Male 12.3
Entorhinal cortex
nTPM: 4.2
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.8
Sample A Female 5.2
Sample B Female 4.4
Sample C Male 4.5
Sample D Male 2.8
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.3
Sample A Female 7.7
Sample B Female 7.1
Sample C Male 8.4
Sample D Male 6.3
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 29.4
Min nTPM: 4.4
Sample A Female 17.1
Sample B Female 11.9
Sample C Male 29.4
Sample D Male 4.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.2
Sample A Male 8.3
Sample B Male 8.2
Sample C Female 10.5
Sample D Female 11.4
Hippocampal formation
nTPM: 5.9
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.2
Sample A Male 6.2
Sample B Male 6.0
Sample C Female 4.2
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75080750 Antisense, RP_060412_04_G11, Mouse strain C57BL/6J (56 days, male) 0.3
79762714 Antisense, RP_071204_04_D12, Mouse strain C57BL/6J (56 days, male) 0.1

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