HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:96.2 nTPM
HPA:96.2 nTPM
GTEx:94.9 nTPM
FANTOM5:115.6 Scaled Tags Per Million
Pig:36.9 nTPM
Mouse:109.7 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065396
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.2
Sample id Sample description nTPM
Hippocampus
nTPM: 87.1
1911 Female, age 85, right hemisphere 91.8
2529 Female, age 94, left hemisphere 91.0
2621 Female, age 67, right hemisphere 87.9
2148 Female, age 91, left hemisphere 87.4
1855 Male, age 76, left hemisphere 82.6
1898 Male, age 80, left hemisphere 82.0
Dentate gyrus
nTPM: 83.9
2530 Female, age 94, left hemisphere 93.8
2528 Male, age 74, both hemispheres 88.3
2246 Female, age 85, both hemispheres 84.1
2010 Male, age 76, both hemispheres 81.8
2531 Female, age 67, both hemispheres 78.7
1927 Female, age 91, both hemispheres 76.9
Entorhinal gyrus
nTPM: 88.8
2117 Female, age 91, right hemisphere 103.5
2764 Male, age 80, right hemisphere 93.1
2686 Male, age 75, right hemisphere 86.4
2613 Female, age 94, left hemisphere 84.2
1938 Female, age 85, left hemisphere 84.1
1787 Male, age 76, left hemisphere 81.4
Hippocampus, CA1
nTPM: 81.4
2527 Male, age 74, both hemispheres 88.7
1873 Female, age 85, both hemispheres 83.0
2082 Female, age 91, right hemisphere 82.2
2749 Male, age 80, left hemisphere 81.6
2045 Male, age 76, both hemispheres 71.5
Hippocampus, CA2
nTPM: 86.3
2437 Female, age 94, left hemisphere 92.5
1963 Male, age 80, left hemisphere 91.4
2249 Male, age 74, both hemispheres 87.2
2113 Female, age 91, right hemisphere 84.5
1940 Female, age 85, left hemisphere 82.9
1892 Male, age 76, both hemispheres 79.2
Hippocampus, CA3
nTPM: 81.2
1891 Female, age 85, both hemispheres 95.9
1867 Male, age 76, both hemispheres 84.5
2861 Female, age 67, both hemispheres 81.8
2620 Female, age 94, left hemisphere 77.5
2137 Male, age 80, left hemisphere 74.9
2436 Male, age 74, both hemispheres 72.8
Parahippocampal cortex
nTPM: 83.8
2692 Male, age 74, both hemispheres 104.9
2532 Female, age 72, left hemisphere 89.4
2245 Female, age 91, both hemispheres 85.3
1990 Female, age 91, right hemisphere 84.1
2622 Female, age 67, right hemisphere 81.7
1850 Male, age 80, both hemispheres 81.1
2693 Female, age 94, both hemispheres 80.7
1933 Female, age 85, both hemispheres 78.8
2018 Male, age 76, both hemispheres 78.7
2250 Female, age 67, right hemisphere 73.3
Perirhinal gyrus
nTPM: 74.8
1794 Male, age 80, right hemisphere 77.7
2521 Female, age 94, right hemisphere 76.0
2848 Male, age 76, right hemisphere 75.4
1847 Female, age 91, left hemisphere 72.7
1841 Female, age 85, right hemisphere 72.1
Subiculum
nTPM: 96.2
2438 Female, age 94, left hemisphere 103.1
2042 Male, age 76, both hemispheres 102.6
2619 Male, age 74, both hemispheres 98.6
1901 Male, age 80, both hemispheres 98.1
1977 Female, age 85, both hemispheres 89.1
2729 Female, age 91, right hemisphere 85.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.9
Samples: 197

Max nTPM: 259.5
Min nTPM: 32.1
Std nTPM: 33.6
Median nTPM: 87.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 259.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 222.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 187.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 187.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 186.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 172.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 168.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 165.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 162.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 160.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 154.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.6
FF:10153-102I9 76 years, female 120.3
FF:10169-103B7 60 years, female 110.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.9
Samples: 4

Max nTPM: 49.4
Min nTPM: 18.2
Sample A Female 49.4
Sample B Female 32.3
Sample C Male 47.5
Sample D Male 18.2
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 27.8
Min nTPM: 22.2
Sample A Female 25.3
Sample B Female 27.8
Sample C Male 23.8
Sample D Male 22.2
Subiculum
nTPM: 24.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 21.3
Sample A Female 31.1
Sample B Female 25.7
Sample C Male 21.4
Sample D Male 21.3
Ventral hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 37.5
Min nTPM: 19.4
Sample A Female 31.6
Sample B Female 19.4
Sample C Male 37.5
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.8
Samples: 4

Max nTPM: 100.4
Min nTPM: 91.2
Sample A Male 100.4
Sample B Male 97.7
Sample C Female 94.0
Sample D Female 91.2
Hippocampal formation
nTPM: 109.7
Samples: 4

Max nTPM: 130.4
Min nTPM: 99.5
Sample A Male 99.7
Sample B Male 99.5
Sample C Female 130.4
Sample D Female 109.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
532687 Antisense, RP_040825_01_D10, Mouse strain C57BL/6J (56 days, male) 13.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.