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RNF208
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  • RNF208
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:70.9 nTPM
FANTOM5:0.1 Scaled Tags Per Million
Pig:33.6 nTPM

CAUDATE - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021256Antibody HPA021429
Glial cells LowNot detected
Neuronal cells LowNot detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 70.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 70.9
Samples: 246

Max nTPM: 171.5
Min nTPM: 26.0
Std nTPM: 21.4
Median nTPM: 68.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 171.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 139.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 136.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 128.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 127.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 120.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 118.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 113.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 112.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 112.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 112.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 111.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 111.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 110.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 109.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 109.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 108.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 107.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 105.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 105.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 102.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 101.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 100.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 98.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 98.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 98.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 97.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 94.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 94.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 93.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 92.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 92.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 91.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 91.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 90.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 90.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 90.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 89.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 89.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 89.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 88.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 88.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 87.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 87.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 87.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 86.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 86.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 86.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 86.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 86.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 86.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 85.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 85.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 84.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 83.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 83.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 83.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 83.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 83.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 81.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 81.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 81.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 80.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 80.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 79.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 79.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 78.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 77.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 77.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 77.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 77.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 77.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 76.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 76.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 76.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 76.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 76.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 76.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 76.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 75.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 75.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 74.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 74.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 74.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 74.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 74.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 74.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 74.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 74.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 74.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 73.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 72.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 72.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 72.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 72.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 72.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 72.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 72.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 72.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 71.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 71.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 71.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 71.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 70.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 70.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 70.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 69.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 69.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 68.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 68.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 68.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 68.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 68.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 68.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 67.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 67.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 67.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 67.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 67.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 67.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 66.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 66.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 66.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 66.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 66.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 66.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 65.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 64.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 64.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 64.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 64.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 64.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 63.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 63.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 63.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 63.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 63.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 63.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 62.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 62.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 61.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 61.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 61.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 61.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 61.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 60.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 60.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 60.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 60.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 59.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 59.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 58.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 58.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 57.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 57.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 56.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 56.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 55.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 55.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 54.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 54.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 54.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 53.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 52.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 52.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 51.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 51.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 51.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 50.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 49.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 49.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 48.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 45.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 45.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 45.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 44.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 44.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 42.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 40.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 40.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 38.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 38.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 37.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 37.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 36.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 34.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 34.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 34.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 33.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 32.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 0.1
FF:10164-103B2 76 years, female 0.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 33.6
Pig sample Sample description nTPM
Caudate
nTPM: 33.6
Samples: 4

Max nTPM: 44.3
Min nTPM: 23.7
Sample A Female 23.7
Sample B Female 36.7
Sample C Male 44.3
Sample D Male 29.7

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