HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.5 nTPM
HPA:48.5 nTPM
GTEx:49.7 nTPM
FANTOM5:61.8 Scaled Tags Per Million
Pig:16.0 nTPM
Mouse:116.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 45.5
1898 Male, age 80, left hemisphere 47.7
2621 Female, age 67, right hemisphere 45.7
1855 Male, age 76, left hemisphere 45.6
2529 Female, age 94, left hemisphere 45.3
2148 Female, age 91, left hemisphere 45.2
1911 Female, age 85, right hemisphere 43.2
Dentate gyrus
nTPM: 46.2
2246 Female, age 85, both hemispheres 47.3
1927 Female, age 91, both hemispheres 47.2
2530 Female, age 94, left hemisphere 46.5
2010 Male, age 76, both hemispheres 46.1
2528 Male, age 74, both hemispheres 46.0
2531 Female, age 67, both hemispheres 44.1
Entorhinal gyrus
nTPM: 44.3
1938 Female, age 85, left hemisphere 45.9
2764 Male, age 80, right hemisphere 45.4
1787 Male, age 76, left hemisphere 45.3
2117 Female, age 91, right hemisphere 43.9
2613 Female, age 94, left hemisphere 43.1
2686 Male, age 75, right hemisphere 42.1
Hippocampus, CA1
nTPM: 46.4
2749 Male, age 80, left hemisphere 51.1
2527 Male, age 74, both hemispheres 48.7
2082 Female, age 91, right hemisphere 45.1
1873 Female, age 85, both hemispheres 43.9
2045 Male, age 76, both hemispheres 43.4
Hippocampus, CA2
nTPM: 45.7
1892 Male, age 76, both hemispheres 48.3
1963 Male, age 80, left hemisphere 46.9
1940 Female, age 85, left hemisphere 45.9
2249 Male, age 74, both hemispheres 45.5
2437 Female, age 94, left hemisphere 43.9
2113 Female, age 91, right hemisphere 43.8
Hippocampus, CA3
nTPM: 45.3
2137 Male, age 80, left hemisphere 48.8
1867 Male, age 76, both hemispheres 46.3
2861 Female, age 67, both hemispheres 45.9
2436 Male, age 74, both hemispheres 45.8
1891 Female, age 85, both hemispheres 43.1
2620 Female, age 94, left hemisphere 42.0
Parahippocampal cortex
nTPM: 45.9
2245 Female, age 91, both hemispheres 48.3
2532 Female, age 72, left hemisphere 47.7
1850 Male, age 80, both hemispheres 46.5
1933 Female, age 85, both hemispheres 46.5
2018 Male, age 76, both hemispheres 46.3
2250 Female, age 67, right hemisphere 46.2
1990 Female, age 91, right hemisphere 45.5
2692 Male, age 74, both hemispheres 44.4
2622 Female, age 67, right hemisphere 44.1
2693 Female, age 94, both hemispheres 43.4
Perirhinal gyrus
nTPM: 48.5
1794 Male, age 80, right hemisphere 50.4
1847 Female, age 91, left hemisphere 49.6
1841 Female, age 85, right hemisphere 48.5
2521 Female, age 94, right hemisphere 48.2
2848 Male, age 76, right hemisphere 46.1
Subiculum
nTPM: 45.4
2438 Female, age 94, left hemisphere 46.2
2729 Female, age 91, right hemisphere 45.9
1901 Male, age 80, both hemispheres 45.5
2619 Male, age 74, both hemispheres 45.4
1977 Female, age 85, both hemispheres 45.1
2042 Male, age 76, both hemispheres 44.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.7
Samples: 197

Max nTPM: 105.9
Min nTPM: 22.9
Std nTPM: 12.7
Median nTPM: 48.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 105.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 91.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 90.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 86.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 85.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 81.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 78.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 78.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 72.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 71.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 71.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.8
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 52.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 13.2
Sample A Female 19.2
Sample B Female 18.0
Sample C Male 13.6
Sample D Male 13.2
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 14.7
Sample A Female 16.5
Sample B Female 16.1
Sample C Male 15.4
Sample D Male 14.7
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 19.5
Min nTPM: 13.9
Sample A Female 19.5
Sample B Female 16.0
Sample C Male 13.9
Sample D Male 13.9
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.0
Sample A Female 14.8
Sample B Female 13.0
Sample C Male 16.1
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 116.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.4
Samples: 4

Max nTPM: 123.6
Min nTPM: 103.1
Sample A Male 103.1
Sample B Male 123.6
Sample C Female 117.8
Sample D Female 105.1
Hippocampal formation
nTPM: 116.3
Samples: 4

Max nTPM: 130.2
Min nTPM: 101.0
Sample A Male 130.2
Sample B Male 101.0
Sample C Female 124.4
Sample D Female 109.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69117044 Antisense, RP_050321_01_F06, Mouse strain C57BL/6J (56 days, male) 1.3

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