HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.3 nTPM
HPA:49.3 nTPM
GTEx:102.2 nTPM
FANTOM5:98.2 Scaled Tags Per Million
Pig:68.3 nTPM
Mouse:200.8 nTPM
Allen mouse:16.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004484Antibody CAB034894
Glial cells Not detectedMedium
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.3
Sample id Sample description nTPM
Hippocampus
nTPM: 46.0
1898 Male, age 80, left hemisphere 52.7
2529 Female, age 94, left hemisphere 46.8
2148 Female, age 91, left hemisphere 45.3
1855 Male, age 76, left hemisphere 44.8
2621 Female, age 67, right hemisphere 43.5
1911 Female, age 85, right hemisphere 43.0
Dentate gyrus
nTPM: 45.7
1927 Female, age 91, both hemispheres 48.0
2010 Male, age 76, both hemispheres 47.3
2528 Male, age 74, both hemispheres 45.7
2530 Female, age 94, left hemisphere 45.5
2246 Female, age 85, both hemispheres 45.1
2531 Female, age 67, both hemispheres 42.6
Entorhinal gyrus
nTPM: 45.0
2764 Male, age 80, right hemisphere 48.8
1938 Female, age 85, left hemisphere 46.9
1787 Male, age 76, left hemisphere 46.3
2117 Female, age 91, right hemisphere 45.5
2613 Female, age 94, left hemisphere 41.2
2686 Male, age 75, right hemisphere 41.1
Hippocampus, CA1
nTPM: 49.3
2749 Male, age 80, left hemisphere 61.3
2527 Male, age 74, both hemispheres 48.0
1873 Female, age 85, both hemispheres 46.4
2045 Male, age 76, both hemispheres 45.7
2082 Female, age 91, right hemisphere 45.1
Hippocampus, CA2
nTPM: 48.0
1963 Male, age 80, left hemisphere 51.6
2249 Male, age 74, both hemispheres 51.2
1892 Male, age 76, both hemispheres 48.5
2437 Female, age 94, left hemisphere 45.9
2113 Female, age 91, right hemisphere 45.8
1940 Female, age 85, left hemisphere 45.2
Hippocampus, CA3
nTPM: 46.8
2137 Male, age 80, left hemisphere 53.3
2436 Male, age 74, both hemispheres 51.2
1867 Male, age 76, both hemispheres 47.3
1891 Female, age 85, both hemispheres 44.6
2620 Female, age 94, left hemisphere 43.8
2861 Female, age 67, both hemispheres 40.7
Parahippocampal cortex
nTPM: 44.7
1850 Male, age 80, both hemispheres 47.7
1933 Female, age 85, both hemispheres 47.1
2250 Female, age 67, right hemisphere 46.9
1990 Female, age 91, right hemisphere 46.5
2245 Female, age 91, both hemispheres 46.1
2018 Male, age 76, both hemispheres 44.5
2693 Female, age 94, both hemispheres 43.0
2532 Female, age 72, left hemisphere 42.4
2692 Male, age 74, both hemispheres 41.8
2622 Female, age 67, right hemisphere 41.2
Perirhinal gyrus
nTPM: 47.6
1794 Male, age 80, right hemisphere 53.2
1847 Female, age 91, left hemisphere 51.7
1841 Female, age 85, right hemisphere 45.3
2521 Female, age 94, right hemisphere 45.2
2848 Male, age 76, right hemisphere 42.3
Subiculum
nTPM: 44.2
1977 Female, age 85, both hemispheres 47.4
1901 Male, age 80, both hemispheres 47.2
2729 Female, age 91, right hemisphere 44.1
2619 Male, age 74, both hemispheres 43.4
2042 Male, age 76, both hemispheres 42.3
2438 Female, age 94, left hemisphere 40.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 102.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 102.2
Samples: 197

Max nTPM: 250.4
Min nTPM: 37.2
Std nTPM: 32.9
Median nTPM: 97.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 250.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 218.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 206.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 198.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 176.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 169.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 167.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 164.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 162.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 162.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 159.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.2
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 67.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 68.3
Samples: 4

Max nTPM: 87.0
Min nTPM: 55.5
Sample A Female 87.0
Sample B Female 62.4
Sample C Male 68.4
Sample D Male 55.5
Entorhinal cortex
nTPM: 58.3
Samples: 4

Max nTPM: 70.3
Min nTPM: 46.3
Sample A Female 58.8
Sample B Female 70.3
Sample C Male 57.8
Sample D Male 46.3
Subiculum
nTPM: 53.3
Samples: 4

Max nTPM: 69.0
Min nTPM: 47.0
Sample A Female 69.0
Sample B Female 48.3
Sample C Male 47.0
Sample D Male 48.8
Ventral hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 77.1
Min nTPM: 44.4
Sample A Female 70.8
Sample B Female 44.4
Sample C Male 77.1
Sample D Male 61.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 200.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 193.1
Samples: 4

Max nTPM: 208.4
Min nTPM: 180.5
Sample A Male 185.1
Sample B Male 208.4
Sample C Female 198.3
Sample D Female 180.5
Hippocampal formation
nTPM: 200.8
Samples: 4

Max nTPM: 218.1
Min nTPM: 186.2
Sample A Male 218.1
Sample B Male 186.2
Sample C Female 204.6
Sample D Female 194.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.9
67767465 Antisense, RP_040916_02_B04, Mouse strain C57BL/6J (56 days, male) 16.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.