COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:73.0 nTPM
HPA:38.7 nTPM
GTEx:73.0 nTPM
FANTOM5:19.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA026288Antibody CAB009626
Endothelial cells LowMedium
Glandular cells HighMedium
Peripheral nerve/ganglion Not detectedHigh





COLON - HPA RNA-seqi
Average nTPM 38.7
overview
Male, age 54 		Colon sample 67
nTPM: 58.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 40.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 38.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 30.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 35.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 38.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 27.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 40.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 37.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 34.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 34.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 35.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 51.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 73.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 73.0
Samples: 373

Max nTPM: 123.6
Min nTPM: 39.3
Std nTPM: 16.8
Median nTPM: 70.7
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 123.6
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 123.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 123.3
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 113.8
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 112.9
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 112.5
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 111.3
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 111.3
GTEX-1GMR3-2526-SM-7P8QS 40-49 years, male 110.9
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 109.3
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 108.9
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Colon - Transverse
Average nTPM: 59.0
Samples: 406

Max nTPM: 269.1
Min nTPM: 31.2
Std nTPM: 22.2
Median nTPM: 54.7
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 269.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 224.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 144.3
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 143.5
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 130.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 128.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 111.3
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 109.6
GTEX-1GMR3-2826-SM-9WPOG 40-49 years, male 109.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 106.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 105.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 19.1
FF:10014-101C5 62,83,84 years, mixed 19.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.