HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.3 nTPM
HPA:57.3 nTPM
GTEx:51.7 nTPM
FANTOM5:47.9 Scaled Tags Per Million
Pig:21.2 nTPM
Mouse:14.3 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063078
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.3
Sample id Sample description nTPM
Hippocampus
nTPM: 57.3
1911 Female, age 85, right hemisphere 59.2
2148 Female, age 91, left hemisphere 58.9
1898 Male, age 80, left hemisphere 58.0
2529 Female, age 94, left hemisphere 57.2
1855 Male, age 76, left hemisphere 57.0
2621 Female, age 67, right hemisphere 53.4
Dentate gyrus
nTPM: 55.1
2530 Female, age 94, left hemisphere 62.6
2528 Male, age 74, both hemispheres 59.9
2246 Female, age 85, both hemispheres 54.4
2010 Male, age 76, both hemispheres 52.3
1927 Female, age 91, both hemispheres 51.3
2531 Female, age 67, both hemispheres 49.9
Entorhinal gyrus
nTPM: 54.1
2117 Female, age 91, right hemisphere 63.7
2764 Male, age 80, right hemisphere 54.4
1787 Male, age 76, left hemisphere 52.8
2613 Female, age 94, left hemisphere 52.2
1938 Female, age 85, left hemisphere 51.1
2686 Male, age 75, right hemisphere 50.5
Hippocampus, CA1
nTPM: 53.6
2082 Female, age 91, right hemisphere 57.0
2527 Male, age 74, both hemispheres 56.7
1873 Female, age 85, both hemispheres 54.2
2749 Male, age 80, left hemisphere 52.6
2045 Male, age 76, both hemispheres 47.4
Hippocampus, CA2
nTPM: 55.6
1963 Male, age 80, left hemisphere 66.2
2249 Male, age 74, both hemispheres 57.8
2113 Female, age 91, right hemisphere 57.6
1940 Female, age 85, left hemisphere 53.2
2437 Female, age 94, left hemisphere 52.3
1892 Male, age 76, both hemispheres 46.2
Hippocampus, CA3
nTPM: 53.9
2861 Female, age 67, both hemispheres 58.5
1891 Female, age 85, both hemispheres 56.9
2620 Female, age 94, left hemisphere 54.7
2137 Male, age 80, left hemisphere 53.1
2436 Male, age 74, both hemispheres 50.6
1867 Male, age 76, both hemispheres 49.4
Parahippocampal cortex
nTPM: 50.3
2692 Male, age 74, both hemispheres 57.8
2018 Male, age 76, both hemispheres 53.7
1990 Female, age 91, right hemisphere 51.5
2245 Female, age 91, both hemispheres 50.4
2622 Female, age 67, right hemisphere 50.2
1933 Female, age 85, both hemispheres 49.4
1850 Male, age 80, both hemispheres 49.1
2532 Female, age 72, left hemisphere 48.3
2250 Female, age 67, right hemisphere 47.0
2693 Female, age 94, both hemispheres 45.7
Perirhinal gyrus
nTPM: 46.2
1794 Male, age 80, right hemisphere 50.7
2848 Male, age 76, right hemisphere 46.1
1847 Female, age 91, left hemisphere 45.4
1841 Female, age 85, right hemisphere 45.0
2521 Female, age 94, right hemisphere 43.8
Subiculum
nTPM: 57.3
2042 Male, age 76, both hemispheres 64.4
2729 Female, age 91, right hemisphere 62.2
2619 Male, age 74, both hemispheres 58.5
1901 Male, age 80, both hemispheres 56.9
1977 Female, age 85, both hemispheres 53.3
2438 Female, age 94, left hemisphere 48.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.7
Samples: 197

Max nTPM: 128.4
Min nTPM: 17.6
Std nTPM: 16.3
Median nTPM: 50.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 128.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 97.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 91.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 88.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 87.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 87.2
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 86.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 85.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 85.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 83.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 82.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.9
FF:10153-102I9 76 years, female 58.1
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.2
Samples: 4

Max nTPM: 27.9
Min nTPM: 16.8
Sample A Female 27.9
Sample B Female 20.0
Sample C Male 20.1
Sample D Male 16.8
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.3
Sample A Female 20.5
Sample B Female 21.3
Sample C Male 20.2
Sample D Male 15.3
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 25.1
Min nTPM: 16.2
Sample A Female 25.1
Sample B Female 16.2
Sample C Male 16.3
Sample D Male 17.6
Ventral hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 25.3
Min nTPM: 17.3
Sample A Female 20.9
Sample B Female 17.3
Sample C Male 25.3
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 13.6
Min nTPM: 12.5
Sample A Male 13.0
Sample B Male 12.8
Sample C Female 13.6
Sample D Female 12.5
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 11.8
Sample A Male 12.4
Sample B Male 11.8
Sample C Female 16.5
Sample D Female 16.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69980160 Antisense, RP_050512_04_A04, Mouse strain C57BL/6J (56 days, male) 0.9

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