HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.9 nTPM
HPA:11.9 nTPM
GTEx:21.7 nTPM
FANTOM5:18.3 Scaled Tags Per Million
Mouse:3.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045350
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.9
Sample id Sample description nTPM
Hippocampus
nTPM: 11.7
2529 Female, age 94, left hemisphere 13.4
1898 Male, age 80, left hemisphere 12.3
1911 Female, age 85, right hemisphere 12.2
2148 Female, age 91, left hemisphere 11.2
1855 Male, age 76, left hemisphere 10.8
2621 Female, age 67, right hemisphere 10.4
Dentate gyrus
nTPM: 11.3
2531 Female, age 67, both hemispheres 12.0
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.4
2530 Female, age 94, left hemisphere 11.1
1927 Female, age 91, both hemispheres 10.9
2246 Female, age 85, both hemispheres 10.9
Entorhinal gyrus
nTPM: 11.7
2117 Female, age 91, right hemisphere 13.0
1787 Male, age 76, left hemisphere 12.2
1938 Female, age 85, left hemisphere 12.1
2764 Male, age 80, right hemisphere 11.8
2613 Female, age 94, left hemisphere 10.8
2686 Male, age 75, right hemisphere 10.4
Hippocampus, CA1
nTPM: 11.9
2749 Male, age 80, left hemisphere 12.7
2527 Male, age 74, both hemispheres 12.2
2045 Male, age 76, both hemispheres 12.1
2082 Female, age 91, right hemisphere 11.9
1873 Female, age 85, both hemispheres 10.5
Hippocampus, CA2
nTPM: 11.6
2249 Male, age 74, both hemispheres 13.2
1940 Female, age 85, left hemisphere 12.5
2113 Female, age 91, right hemisphere 11.6
1963 Male, age 80, left hemisphere 11.1
2437 Female, age 94, left hemisphere 10.9
1892 Male, age 76, both hemispheres 10.2
Hippocampus, CA3
nTPM: 11.8
2620 Female, age 94, left hemisphere 13.1
2137 Male, age 80, left hemisphere 12.2
2436 Male, age 74, both hemispheres 11.8
2861 Female, age 67, both hemispheres 11.5
1867 Male, age 76, both hemispheres 11.3
1891 Female, age 85, both hemispheres 11.0
Parahippocampal cortex
nTPM: 11.3
1990 Female, age 91, right hemisphere 12.1
2018 Male, age 76, both hemispheres 12.1
2245 Female, age 91, both hemispheres 11.9
2692 Male, age 74, both hemispheres 11.9
2622 Female, age 67, right hemisphere 11.5
2250 Female, age 67, right hemisphere 11.4
2532 Female, age 72, left hemisphere 11.1
1933 Female, age 85, both hemispheres 10.8
1850 Male, age 80, both hemispheres 10.7
2693 Female, age 94, both hemispheres 9.9
Perirhinal gyrus
nTPM: 11.3
1794 Male, age 80, right hemisphere 12.4
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.3
2848 Male, age 76, right hemisphere 10.7
2521 Female, age 94, right hemisphere 10.5
Subiculum
nTPM: 10.8
2729 Female, age 91, right hemisphere 12.2
1977 Female, age 85, both hemispheres 12.1
1901 Male, age 80, both hemispheres 11.5
2042 Male, age 76, both hemispheres 10.8
2619 Male, age 74, both hemispheres 10.3
2438 Female, age 94, left hemisphere 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.7
Samples: 197

Max nTPM: 50.0
Min nTPM: 6.8
Std nTPM: 5.9
Median nTPM: 21.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 50.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 43.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 39.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 36.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 33.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 33.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 31.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.3
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 11.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.1
Sample A Male 3.5
Sample B Male 2.8
Sample C Female 3.2
Sample D Female 2.1
Hippocampal formation
nTPM: 3.4
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.0
Sample A Male 2.0
Sample B Male 3.8
Sample C Female 3.4
Sample D Female 4.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68546001 Antisense, RP_050120_01_H06, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.