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PPP3R1
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  • PPP3R1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:124.7 nTPM
FANTOM5:593.8 Scaled Tags Per Million
Pig:237.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047157Antibody CAB005610
Glial cells Not detectedHigh
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 124.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 124.7
Samples: 246

Max nTPM: 428.7
Min nTPM: 23.3
Std nTPM: 67.5
Median nTPM: 117.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 428.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 293.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 271.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 269.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 262.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 255.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 250.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 248.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 247.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 238.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 235.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 231.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 231.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 230.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 229.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 229.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 228.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 225.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 224.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 224.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 222.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 222.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 219.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 219.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 218.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 217.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 215.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 214.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 212.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 205.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 205.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 204.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 204.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 203.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 202.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 201.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 201.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 200.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 199.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 199.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 197.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 196.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 196.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 195.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 195.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 193.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 192.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 192.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 192.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 189.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 189.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 187.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 186.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 184.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 181.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 176.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 175.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 174.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 174.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 174.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 173.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 173.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 171.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 171.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 170.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 170.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 170.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 169.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 168.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 168.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 168.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 166.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 166.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 165.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 164.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 163.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 160.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 160.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 160.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 158.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 158.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 157.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 157.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 155.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 154.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 152.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 149.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 149.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 149.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 148.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 147.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 147.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 146.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 145.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 143.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 140.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 140.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 137.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 136.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 135.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 135.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 135.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 134.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 134.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 134.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 133.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 132.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 132.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 132.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 131.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 131.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 130.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 129.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 128.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 126.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 125.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 124.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 121.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 119.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 119.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 118.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 116.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 116.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 116.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 115.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 112.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 112.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 111.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 109.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 108.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 108.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 107.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 105.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 105.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 105.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 104.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 103.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 102.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 102.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 99.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 99.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 99.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 98.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 98.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 97.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 96.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 95.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 95.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 93.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 90.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 90.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 90.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 90.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 89.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 89.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 89.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 89.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 89.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 88.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 86.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 85.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 84.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 82.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 81.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 79.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 79.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 78.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 78.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 72.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 71.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 70.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 69.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 67.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 65.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 65.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 64.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 63.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 61.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 61.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 60.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 60.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 60.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 60.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 59.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 56.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 53.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 50.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 50.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 49.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 48.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 47.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 46.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 45.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 45.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 44.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 44.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 44.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 44.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 43.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 43.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 40.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 40.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 40.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 40.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 39.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 38.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 37.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 35.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 35.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 35.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 33.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 33.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 32.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 31.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 30.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 30.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 30.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 26.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 25.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 25.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 24.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 24.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 23.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 593.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 593.8
FF:10164-103B2 76 years, female 593.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 237.4
Pig sample Sample description nTPM
Caudate
nTPM: 237.4
Samples: 4

Max nTPM: 285.3
Min nTPM: 207.7
Sample A Female 207.7
Sample B Female 219.0
Sample C Male 285.3
Sample D Male 237.7

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