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UBA52
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  • UBA52
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:642.8 nTPM
FANTOM5:210.1 Scaled Tags Per Million
Pig:313.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041344Antibody HPA049132
Glial cells Not detectedHigh
Neuronal cells LowMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 642.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 642.8
Samples: 246

Max nTPM: 1450.2
Min nTPM: 273.8
Std nTPM: 166.0
Median nTPM: 614.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1450.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1307.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1236.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1207.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1201.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1056.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1050.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1049.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1001.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1000.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 997.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 985.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 965.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 915.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 904.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 890.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 886.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 884.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 872.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 872.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 859.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 859.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 837.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 829.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 821.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 818.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 814.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 811.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 809.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 803.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 801.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 797.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 789.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 786.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 779.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 772.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 770.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 767.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 762.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 759.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 759.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 757.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 757.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 755.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 755.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 750.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 749.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 743.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 743.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 743.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 742.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 741.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 737.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 736.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 731.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 730.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 726.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 726.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 725.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 724.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 722.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 721.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 718.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 718.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 715.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 715.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 713.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 711.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 711.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 709.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 706.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 704.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 703.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 698.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 697.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 695.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 693.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 692.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 691.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 691.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 690.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 685.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 684.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 684.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 682.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 679.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 677.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 677.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 669.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 669.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 668.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 667.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 663.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 662.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 660.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 660.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 659.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 654.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 654.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 654.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 650.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 648.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 648.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 645.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 645.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 643.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 642.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 642.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 642.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 640.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 640.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 639.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 635.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 635.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 634.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 634.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 631.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 629.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 627.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 625.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 625.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 624.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 615.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 614.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 612.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 612.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 612.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 611.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 610.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 610.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 610.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 609.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 607.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 606.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 604.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 603.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 601.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 599.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 598.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 597.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 594.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 592.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 589.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 588.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 587.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 587.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 585.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 585.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 584.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 580.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 580.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 579.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 579.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 576.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 576.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 575.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 574.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 572.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 569.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 569.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 569.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 567.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 566.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 565.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 564.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 563.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 563.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 562.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 561.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 558.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 555.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 553.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 552.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 552.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 549.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 548.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 545.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 544.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 544.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 543.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 540.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 537.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 532.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 531.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 530.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 529.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 528.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 528.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 524.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 523.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 523.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 521.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 521.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 519.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 518.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 518.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 516.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 513.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 512.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 512.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 512.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 510.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 509.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 508.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 506.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 504.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 498.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 496.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 494.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 491.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 487.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 481.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 480.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 479.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 477.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 477.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 477.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 477.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 474.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 473.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 472.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 472.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 470.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 467.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 466.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 465.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 465.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 461.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 460.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 459.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 445.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 441.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 432.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 431.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 428.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 426.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 423.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 401.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 400.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 387.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 387.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 380.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 362.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 339.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 315.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 273.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 210.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 210.1
FF:10164-103B2 76 years, female 210.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 313.2
Pig sample Sample description nTPM
Caudate
nTPM: 313.2
Samples: 4

Max nTPM: 385.1
Min nTPM: 259.0
Sample A Female 282.9
Sample B Female 325.8
Sample C Male 385.1
Sample D Male 259.0

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