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RPS18
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TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1862.8 nTPM
HPA:1862.8 nTPM
GTEx:2063.9 nTPM
FANTOM5:93.9 Scaled Tags Per Million
Pig:242.5 nTPM
Mouse:929.9 nTPM
Allen mouse:3.6 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1862.8
Sample id Sample description nTPM
Amygdala
nTPM: 1862.8
2695 Female, age 67, right hemisphere 1935.7
2514 Male, age 75, right hemisphere 1873.0
2517 Female, age 94, left hemisphere 1844.7
1987 Female, age 91, left hemisphere 1840.7
2814 Male, age 76, right hemisphere 1819.9
Basal amygdala
nTPM: 1823.0
2827 Female, age 67, right hemisphere 1907.5
2609 Male, age 75, right hemisphere 1841.4
2110 Male, age 80, left hemisphere 1821.6
2685 Female, age 94, left hemisphere 1811.8
1955 Male, age 76, both hemispheres 1780.3
2243 Female, age 91, right hemisphere 1775.1
Central amygdala
nTPM: 1842.6
2826 Female, age 94, left hemisphere 1978.0
2515 Male, age 75, right hemisphere 1858.9
1905 Male, age 76, both hemispheres 1807.3
2239 Male, age 80, left hemisphere 1797.5
2701 Female, age 91, right hemisphere 1771.4
Corticomedial amygdala
nTPM: 1803.6
2428 Male, age 75, right hemisphere 1826.3
2535 Female, age 67, right hemisphere 1822.8
2829 Male, age 80, left hemisphere 1813.3
2429 Female, age 94, left hemisphere 1800.5
2242 Female, age 91, right hemisphere 1779.6
2240 Male, age 76, both hemispheres 1779.2
Lateral amygdala
nTPM: 1859.4
2830 Female, age 67, right hemisphere 1977.4
2516 Male, age 75, right hemisphere 1907.7
2534 Female, age 94, left hemisphere 1889.5
2256 Male, age 80, left hemisphere 1812.7
2255 Female, age 91, right hemisphere 1788.0
1883 Male, age 76, both hemispheres 1781.0
Stria terminalis, bed nucleus
nTPM: 1772.4
1974 Female, age 91, both hemispheres 1801.4
2201 Male, age 74, unknown 1766.0
2486 Female, age 94, both hemispheres 1749.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2063.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 2063.9
Samples: 152

Max nTPM: 6393.5
Min nTPM: 823.2
Std nTPM: 902.6
Median nTPM: 1861.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 6393.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 5252.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 5203.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 4953.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 4301.9
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 4073.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 3952.4
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 3927.0
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 3831.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 3729.1
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 3617.0
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 3489.3
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 3346.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 3193.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 3147.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 3140.7
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 3007.2
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 2993.2
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 2948.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2932.3
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2908.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 2890.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 2826.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 2825.5
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 2704.4
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 2704.3
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 2691.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2676.0
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 2669.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 2632.1
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 2587.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 2546.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 2518.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 2454.6
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 2433.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 2395.8
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 2393.5
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 2384.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 2371.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 2364.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 2340.9
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 2336.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 2298.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 2283.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 2241.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 2224.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 2222.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 2217.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 2205.6
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 2199.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 2196.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 2172.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 2155.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 2130.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 2120.1
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 2111.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 2091.4
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 2090.5
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 2083.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 2072.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 2007.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1993.4
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1992.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1991.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1986.3
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1979.2
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1977.8
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1965.8
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1954.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1953.5
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1947.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1937.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1934.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1914.7
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1874.1
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1864.2
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1858.8
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1845.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1814.0
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1807.4
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 1773.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1771.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1764.1
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1753.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1732.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1722.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1710.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1706.1
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1697.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1695.0
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1692.9
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1676.5
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1674.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 1665.0
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1656.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 1651.0
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 1634.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1634.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1634.1
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1617.6
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1615.9
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1607.2
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1600.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1580.4
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 1572.1
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1569.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1555.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1550.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1550.6
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 1503.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1496.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1477.8
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1473.3
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1462.9
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1458.3
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1450.0
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1429.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1424.4
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 1400.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 1396.3
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1383.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1379.4
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1358.9
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 1358.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 1351.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1344.1
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 1325.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 1309.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1308.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 1300.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1260.3
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1259.9
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 1240.6
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1234.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 1233.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 1218.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 1191.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 1185.9
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 1174.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 1157.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 1149.3
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1139.5
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1079.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 1077.2
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1048.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 1033.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 1032.6
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 1032.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 980.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 976.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 919.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 823.2
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 93.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 93.9
FF:10151-102I7 76 years, female 93.9

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 242.5
Pig sample Sample description nTPM
Amygdala
nTPM: 242.5
Samples: 4

Max nTPM: 305.3
Min nTPM: 132.6
Sample A Female 303.9
Sample B Female 305.3
Sample C Male 228.3
Sample D Male 132.6

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 929.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 930.0
Samples: 4

Max nTPM: 999.7
Min nTPM: 854.2
Sample A Male 854.2
Sample B Male 956.8
Sample C Female 999.7
Sample D Female 909.1

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 3.6
69873283 Antisense, RP_050510_04_H10, Mouse strain C57BL/6J (56 days, male) 3.6

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