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RPS18
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2565.0 nTPM
HPA:2079.0 nTPM
GTEx:2565.0 nTPM
FANTOM5:211.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA050159
Glandular cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 2079.0
overview
Male, age 65
Small intestine sample 232
nTPM: 2761.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1918.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1832.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1803.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2565.0
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 2565.0
Samples: 187

Max nTPM: 6611.1
Min nTPM: 1028.8
Std nTPM: 870.6
Median nTPM: 2413.2
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 6611.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 5030.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 5016.9
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 4820.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 4737.3
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 4733.2
GTEX-183FY-1626-SM-793D8 20-29 years, male 4381.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 4331.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 4278.4
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 4233.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 4198.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 4066.4
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 4040.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 4036.3
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 4000.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 3937.5
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 3927.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 3836.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 3768.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 3739.2
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 3723.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 3631.6
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 3571.6
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3570.9
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 3531.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 3486.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 3422.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 3416.4
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 3400.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 3375.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 3268.7
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 3183.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 3173.7
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 3163.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 3145.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 3134.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 3123.8
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 3107.3
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 3103.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 3097.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 3092.4
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 3073.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 3064.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 3047.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 3035.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 3032.4
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 3029.8
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 3016.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 3012.3
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 2992.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 2991.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 2988.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2983.5
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 2961.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 2958.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 2953.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2941.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 2923.5
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2912.5
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2895.5
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 2894.7
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2867.4
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2860.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 2844.1
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 2833.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 2807.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2767.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 2745.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 2736.6
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 2734.4
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 2725.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 2712.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 2662.5
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 2656.8
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 2646.1
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2607.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 2568.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 2548.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 2543.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 2542.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2539.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 2536.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 2524.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 2520.6
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 2489.9
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 2480.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2478.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2474.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2451.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 2445.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 2442.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 2439.3
GTEX-1192X-2526-SM-59868 50-59 years, male 2432.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 2413.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2404.5
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 2398.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 2389.5
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 2381.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2366.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 2353.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 2337.0
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 2325.6
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 2321.2
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 2308.7
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 2301.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 2293.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 2284.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 2255.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 2246.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 2233.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 2205.2
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 2200.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 2190.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 2164.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 2139.2
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2129.7
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 2114.9
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 2110.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 2092.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 2081.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 2071.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 2069.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 2065.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 2061.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 2058.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 2034.1
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 2031.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 2030.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 2021.2
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 2002.9
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1992.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1984.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1976.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1973.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1972.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1956.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1949.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1933.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1926.9
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1905.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1890.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1877.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1869.4
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1869.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1864.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1860.9
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1860.4
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1846.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1845.8
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1830.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1829.2
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1820.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1807.5
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1796.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1787.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1769.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1754.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1744.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1736.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1732.5
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1707.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1707.0
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1707.0
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1703.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1698.4
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1696.0
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1694.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1685.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1676.1
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1666.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1643.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1607.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1607.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 1584.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1582.9
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 1539.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1538.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 1489.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 1480.6
GTEX-111YS-1426-SM-5GID8 60-69 years, male 1433.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1424.4
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1416.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1390.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1288.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 1231.7
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1158.2
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1028.8
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 211.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 211.9
FF:10024-101D6 15,40,85 years, mixed 211.9

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