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RPS28
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:134.1 nTPM
HPA:134.1 nTPM
GTEx:148.4 nTPM
FANTOM5:2.8 Scaled Tags Per Million
Pig:546.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 134.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 128.7
2565 Male, age 75, midline 144.7
1981 Female, age 72, midline 132.6
2194 Female, age 79, both hemispheres 122.6
2816 Male, age 47, midline 122.5
2048 Male, age 55, midline 121.0
Cervical spinal cord, dorsal horn
nTPM: 127.7
2173 Female, age 72, unknown 134.7
2069 Male, age 47, both hemispheres 133.2
2296 Male, age 66, both hemispheres 129.5
1877 Male, age 55, unknown 128.8
2297 Male, age 75, both hemispheres 120.1
2721 Male, age 90, both hemispheres 119.8
Cervical spinal cord, ventral horn
nTPM: 134.1
2480 Male, age 75, both hemispheres 152.8
2809 Male, age 90, both hemispheres 145.2
2068 Male, age 55, unknown 132.1
2098 Female, age 72, unknown 131.0
2295 Male, age 66, both hemispheres 122.8
2820 Female, age 79, both hemispheres 120.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 148.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 148.4
Samples: 159

Max nTPM: 324.9
Min nTPM: 50.7
Std nTPM: 52.7
Median nTPM: 137.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 324.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 316.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 296.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 289.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 279.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 278.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 253.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 245.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 242.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 240.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 238.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 236.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 232.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 231.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 230.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 226.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 222.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 222.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 222.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 216.5
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 215.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 213.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 209.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 205.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 201.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 201.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 199.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 198.9
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 198.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 197.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 197.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 197.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 186.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 181.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 180.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 177.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 176.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 175.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 175.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 174.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 171.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 171.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 171.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 169.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 168.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 168.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 164.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 164.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 163.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 163.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 161.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 161.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 160.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 159.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 153.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 152.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 152.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 152.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 152.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 151.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 147.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 147.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 147.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 146.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 146.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 144.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 144.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 143.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 143.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 143.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 143.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 142.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 142.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 141.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 141.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 141.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 140.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 140.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 138.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 137.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 137.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 135.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 135.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 135.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 135.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 134.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 134.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 133.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 133.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 131.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 130.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 130.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 129.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 129.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 128.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 128.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 128.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 128.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 128.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 127.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 125.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 124.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 124.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 122.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 122.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 121.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 120.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 120.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 120.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 119.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 117.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 117.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 115.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 114.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 114.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 114.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 113.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 113.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 112.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 112.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 110.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 110.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 109.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 109.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 109.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 109.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 107.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 107.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 106.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 106.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 104.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 103.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 101.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 101.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 100.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 99.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 98.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 98.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 97.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 95.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 95.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 91.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 90.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 90.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 87.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 85.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 83.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 81.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 81.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 80.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 78.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 77.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 76.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 75.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 73.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 68.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 67.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 64.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 50.7
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 2.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 2.8
FF:10181-103D1 60 years, female 3.5
FF:10159-103A6 76 years, female 2.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 546.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 546.4
Samples: 4

Max nTPM: 826.7
Min nTPM: 379.9
Sample A Female 379.9
Sample B Female 554.4
Sample C Male 826.7
Sample D Male 424.6
Ventral spinal cord
nTPM: 485.1
Samples: 4

Max nTPM: 579.7
Min nTPM: 378.7
Sample A Female 378.7
Sample B Female 508.9
Sample C Male 579.7
Sample D Male 473.0

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