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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:319.6 nTPM
FANTOM5:572.5 Scaled Tags Per Million
Pig:47.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003868Antibody CAB005284
Glial cells LowNot detected
Neuronal cells LowLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 319.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 319.6
Samples: 246

Max nTPM: 679.0
Min nTPM: 96.9
Std nTPM: 107.3
Median nTPM: 308.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 679.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 650.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 647.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 643.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 637.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 632.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 598.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 579.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 579.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 545.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 531.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 523.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 508.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 506.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 504.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 498.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 496.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 491.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 488.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 484.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 475.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 460.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 459.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 458.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 453.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 452.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 449.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 442.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 440.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 437.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 433.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 432.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 432.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 430.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 429.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 428.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 427.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 426.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 425.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 423.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 423.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 423.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 415.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 411.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 407.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 406.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 404.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 402.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 402.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 397.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 396.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 395.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 388.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 387.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 387.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 385.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 384.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 381.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 381.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 377.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 371.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 370.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 369.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 368.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 368.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 368.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 368.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 366.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 364.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 364.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 363.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 362.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 360.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 359.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 357.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 355.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 353.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 352.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 351.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 350.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 349.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 348.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 347.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 346.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 344.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 341.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 341.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 341.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 338.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 338.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 338.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 336.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 335.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 335.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 334.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 333.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 332.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 332.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 330.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 329.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 329.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 328.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 328.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 327.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 325.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 325.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 323.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 320.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 319.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 319.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 319.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 317.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 317.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 315.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 315.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 315.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 314.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 312.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 311.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 311.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 309.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 308.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 308.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 307.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 307.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 303.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 303.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 301.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 301.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 300.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 299.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 298.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 297.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 297.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 296.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 295.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 295.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 292.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 292.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 291.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 290.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 290.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 289.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 287.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 287.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 287.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 286.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 285.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 285.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 285.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 284.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 283.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 283.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 282.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 282.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 281.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 280.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 278.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 278.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 277.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 275.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 275.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 273.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 273.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 272.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 270.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 270.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 269.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 263.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 262.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 261.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 259.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 257.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 252.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 247.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 246.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 244.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 244.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 244.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 244.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 244.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 243.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 242.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 241.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 241.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 240.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 239.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 239.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 237.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 236.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 236.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 233.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 233.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 232.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 232.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 231.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 231.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 231.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 230.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 228.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 225.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 224.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 220.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 219.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 218.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 218.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 217.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 217.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 217.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 214.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 213.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 211.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 202.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 201.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 200.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 200.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 198.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 197.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 191.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 190.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 190.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 190.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 189.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 188.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 187.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 187.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 185.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 185.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 185.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 184.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 182.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 182.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 179.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 179.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 178.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 174.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 163.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 160.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 157.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 148.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 147.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 138.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 129.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 102.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 572.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 572.5
FF:10164-103B2 76 years, female 572.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 47.2
Pig sample Sample description nTPM
Caudate
nTPM: 47.2
Samples: 4

Max nTPM: 59.6
Min nTPM: 38.2
Sample A Female 38.2
Sample B Female 50.8
Sample C Male 59.6
Sample D Male 40.1

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