HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:50.9 nTPM
HPA:50.9 nTPM
GTEx:49.6 nTPM
FANTOM5:41.5 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:86.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.9
Sample id Sample description nTPM
Hippocampus
nTPM: 49.0
1898 Male, age 80, left hemisphere 54.7
1855 Male, age 76, left hemisphere 51.6
1911 Female, age 85, right hemisphere 49.9
2529 Female, age 94, left hemisphere 47.1
2621 Female, age 67, right hemisphere 45.8
2148 Female, age 91, left hemisphere 45.1
Dentate gyrus
nTPM: 48.7
2010 Male, age 76, both hemispheres 53.1
1927 Female, age 91, both hemispheres 51.5
2246 Female, age 85, both hemispheres 48.2
2530 Female, age 94, left hemisphere 48.0
2528 Male, age 74, both hemispheres 46.1
2531 Female, age 67, both hemispheres 45.2
Entorhinal gyrus
nTPM: 47.0
1938 Female, age 85, left hemisphere 49.8
2117 Female, age 91, right hemisphere 47.2
2613 Female, age 94, left hemisphere 47.1
1787 Male, age 76, left hemisphere 46.5
2686 Male, age 75, right hemisphere 45.8
2764 Male, age 80, right hemisphere 45.6
Hippocampus, CA1
nTPM: 50.9
2749 Male, age 80, left hemisphere 56.9
1873 Female, age 85, both hemispheres 53.7
2045 Male, age 76, both hemispheres 51.3
2082 Female, age 91, right hemisphere 46.5
2527 Male, age 74, both hemispheres 46.3
Hippocampus, CA2
nTPM: 49.6
1892 Male, age 76, both hemispheres 53.1
1963 Male, age 80, left hemisphere 52.1
1940 Female, age 85, left hemisphere 50.4
2437 Female, age 94, left hemisphere 48.2
2249 Male, age 74, both hemispheres 47.2
2113 Female, age 91, right hemisphere 46.6
Hippocampus, CA3
nTPM: 49.4
2137 Male, age 80, left hemisphere 55.0
1867 Male, age 76, both hemispheres 54.7
1891 Female, age 85, both hemispheres 50.3
2436 Male, age 74, both hemispheres 46.7
2861 Female, age 67, both hemispheres 45.1
2620 Female, age 94, left hemisphere 44.6
Parahippocampal cortex
nTPM: 47.7
2018 Male, age 76, both hemispheres 50.7
1933 Female, age 85, both hemispheres 50.0
2250 Female, age 67, right hemisphere 49.9
2693 Female, age 94, both hemispheres 49.7
1850 Male, age 80, both hemispheres 49.1
1990 Female, age 91, right hemisphere 47.0
2245 Female, age 91, both hemispheres 46.5
2692 Male, age 74, both hemispheres 46.5
2532 Female, age 72, left hemisphere 45.7
2622 Female, age 67, right hemisphere 42.1
Perirhinal gyrus
nTPM: 49.5
1841 Female, age 85, right hemisphere 53.5
1847 Female, age 91, left hemisphere 49.1
2848 Male, age 76, right hemisphere 48.9
1794 Male, age 80, right hemisphere 48.0
2521 Female, age 94, right hemisphere 48.0
Subiculum
nTPM: 47.6
1901 Male, age 80, both hemispheres 52.1
2042 Male, age 76, both hemispheres 51.0
1977 Female, age 85, both hemispheres 48.0
2729 Female, age 91, right hemisphere 46.2
2438 Female, age 94, left hemisphere 45.6
2619 Male, age 74, both hemispheres 42.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.6
Samples: 197

Max nTPM: 114.3
Min nTPM: 20.9
Std nTPM: 13.6
Median nTPM: 46.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 114.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 107.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 88.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 87.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 85.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 81.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 78.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 76.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 76.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.5
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 25.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.3
Samples: 4

Max nTPM: 32.4
Min nTPM: 22.0
Sample A Female 32.4
Sample B Female 23.2
Sample C Male 27.4
Sample D Male 22.0
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.8
Min nTPM: 12.5
Sample A Female 18.1
Sample B Female 18.6
Sample C Male 19.8
Sample D Male 12.5
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.4
Sample A Female 24.3
Sample B Female 17.4
Sample C Male 17.8
Sample D Male 22.3
Ventral hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 24.7
Min nTPM: 16.8
Sample A Female 19.8
Sample B Female 16.8
Sample C Male 17.5
Sample D Male 24.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 66.8
Min nTPM: 56.3
Sample A Male 66.8
Sample B Male 61.5
Sample C Female 64.5
Sample D Female 56.3
Hippocampal formation
nTPM: 86.7
Samples: 4

Max nTPM: 101.8
Min nTPM: 76.4
Sample A Male 101.8
Sample B Male 79.3
Sample C Female 89.4
Sample D Female 76.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71280814 Antisense, RP_050818_01_F07, Mouse strain C57BL/6J (56 days, male) 1.7

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