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DBNDD2
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:739.9 nTPM
HPA:739.9 nTPM
GTEx:1526.5 nTPM
FANTOM5:389.3 Scaled Tags Per Million
Pig:83.9 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 739.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 671.3
1981 Female, age 72, midline 747.2
2048 Male, age 55, midline 672.5
2194 Female, age 79, both hemispheres 670.7
2816 Male, age 47, midline 648.7
2565 Male, age 75, midline 617.3
Cervical spinal cord, dorsal horn
nTPM: 739.9
2296 Male, age 66, both hemispheres 931.0
2173 Female, age 72, unknown 899.9
2069 Male, age 47, both hemispheres 735.8
1877 Male, age 55, unknown 683.9
2297 Male, age 75, both hemispheres 604.2
2721 Male, age 90, both hemispheres 584.8
Cervical spinal cord, ventral horn
nTPM: 703.4
2068 Male, age 55, unknown 741.1
2098 Female, age 72, unknown 734.4
2820 Female, age 79, both hemispheres 690.5
2480 Male, age 75, both hemispheres 689.1
2809 Male, age 90, both hemispheres 687.1
2295 Male, age 66, both hemispheres 678.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1526.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1526.5
Samples: 159

Max nTPM: 2810.5
Min nTPM: 427.3
Std nTPM: 534.2
Median nTPM: 1493.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2810.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 2804.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2721.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2599.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2594.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2534.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2532.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 2478.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2420.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2376.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2375.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2356.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2329.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2301.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2279.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2278.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2265.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2245.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2238.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2221.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2220.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2217.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2187.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2169.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2168.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2158.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2064.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2024.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 2022.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1997.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1991.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1989.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1983.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1966.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1962.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1898.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1885.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1882.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1875.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1868.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1852.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1847.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1841.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1826.5
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1820.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1819.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1814.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1811.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1798.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1797.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1788.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1778.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1748.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1717.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1709.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1703.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1701.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1697.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1696.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1684.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1676.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1662.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1653.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1646.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1632.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1623.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1612.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1580.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1575.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1574.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1574.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1574.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1568.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1541.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1538.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1520.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1509.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1503.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1494.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1493.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1474.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1463.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1462.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1455.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1454.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1445.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1442.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1433.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1422.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1406.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1399.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1396.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1386.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1379.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1376.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1369.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1362.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1344.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1342.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1342.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1333.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1332.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1317.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1311.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1295.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1292.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1291.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1291.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1290.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1264.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1259.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1257.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1250.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1237.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1182.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1180.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1180.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1165.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1153.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1143.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1140.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1123.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1119.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1113.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1088.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1080.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1072.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1071.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1037.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1035.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1032.8
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1030.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1021.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1006.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 994.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 974.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 952.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 949.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 928.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 895.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 886.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 851.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 829.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 795.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 724.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 715.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 714.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 698.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 673.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 653.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 642.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 628.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 597.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 576.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 574.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 562.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 544.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 449.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 427.3
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 389.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 389.3
FF:10181-103D1 60 years, female 469.4
FF:10159-103A6 76 years, female 309.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 83.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 65.9
Samples: 4

Max nTPM: 75.0
Min nTPM: 53.2
Sample A Female 75.0
Sample B Female 63.8
Sample C Male 53.2
Sample D Male 71.4
Ventral spinal cord
nTPM: 83.9
Samples: 4

Max nTPM: 100.7
Min nTPM: 68.8
Sample A Female 85.6
Sample B Female 80.6
Sample C Male 68.8
Sample D Male 100.7

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