HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.5 nTPM
HPA:36.5 nTPM
GTEx:31.1 nTPM
FANTOM5:49.1 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:44.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016552
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.5
Sample id Sample description nTPM
Hippocampus
nTPM: 36.1
1855 Male, age 76, left hemisphere 37.4
2529 Female, age 94, left hemisphere 37.2
1911 Female, age 85, right hemisphere 36.2
1898 Male, age 80, left hemisphere 36.0
2148 Female, age 91, left hemisphere 35.3
2621 Female, age 67, right hemisphere 34.2
Dentate gyrus
nTPM: 35.2
2010 Male, age 76, both hemispheres 36.6
2528 Male, age 74, both hemispheres 36.5
1927 Female, age 91, both hemispheres 35.5
2246 Female, age 85, both hemispheres 35.2
2530 Female, age 94, left hemisphere 34.2
2531 Female, age 67, both hemispheres 32.8
Entorhinal gyrus
nTPM: 34.6
2117 Female, age 91, right hemisphere 36.9
1938 Female, age 85, left hemisphere 35.8
1787 Male, age 76, left hemisphere 34.7
2764 Male, age 80, right hemisphere 34.4
2686 Male, age 75, right hemisphere 34.1
2613 Female, age 94, left hemisphere 31.9
Hippocampus, CA1
nTPM: 36.5
2749 Male, age 80, left hemisphere 37.4
1873 Female, age 85, both hemispheres 37.2
2527 Male, age 74, both hemispheres 36.6
2045 Male, age 76, both hemispheres 36.0
2082 Female, age 91, right hemisphere 35.5
Hippocampus, CA2
nTPM: 35.7
2249 Male, age 74, both hemispheres 37.4
1892 Male, age 76, both hemispheres 37.2
1963 Male, age 80, left hemisphere 36.2
1940 Female, age 85, left hemisphere 34.9
2113 Female, age 91, right hemisphere 34.9
2437 Female, age 94, left hemisphere 33.4
Hippocampus, CA3
nTPM: 35.4
2436 Male, age 74, both hemispheres 37.0
1867 Male, age 76, both hemispheres 36.7
1891 Female, age 85, both hemispheres 36.6
2137 Male, age 80, left hemisphere 35.5
2861 Female, age 67, both hemispheres 33.6
2620 Female, age 94, left hemisphere 33.3
Parahippocampal cortex
nTPM: 35.2
2692 Male, age 74, both hemispheres 36.8
2018 Male, age 76, both hemispheres 36.6
1933 Female, age 85, both hemispheres 35.9
1850 Male, age 80, both hemispheres 35.4
1990 Female, age 91, right hemisphere 35.1
2250 Female, age 67, right hemisphere 35.1
2245 Female, age 91, both hemispheres 34.4
2693 Female, age 94, both hemispheres 34.4
2622 Female, age 67, right hemisphere 34.2
2532 Female, age 72, left hemisphere 33.9
Perirhinal gyrus
nTPM: 35.3
1847 Female, age 91, left hemisphere 36.3
1841 Female, age 85, right hemisphere 36.2
1794 Male, age 80, right hemisphere 35.4
2521 Female, age 94, right hemisphere 34.6
2848 Male, age 76, right hemisphere 33.9
Subiculum
nTPM: 35.9
2619 Male, age 74, both hemispheres 36.3
1901 Male, age 80, both hemispheres 36.0
2042 Male, age 76, both hemispheres 35.9
2438 Female, age 94, left hemisphere 35.9
2729 Female, age 91, right hemisphere 35.9
1977 Female, age 85, both hemispheres 35.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.1
Samples: 197

Max nTPM: 73.8
Min nTPM: 15.9
Std nTPM: 9.1
Median nTPM: 29.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 62.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 60.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 51.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 50.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 49.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 49.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 48.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.1
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 39.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 28.6
Min nTPM: 25.2
Sample A Female 28.6
Sample B Female 27.7
Sample C Male 25.2
Sample D Male 25.5
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 24.4
Min nTPM: 17.3
Sample A Female 17.3
Sample B Female 24.4
Sample C Male 22.6
Sample D Male 19.2
Subiculum
nTPM: 23.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 20.7
Sample A Female 24.5
Sample B Female 25.5
Sample C Male 21.7
Sample D Male 20.7
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 27.6
Min nTPM: 19.7
Sample A Female 19.7
Sample B Female 21.2
Sample C Male 25.4
Sample D Male 27.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 42.9
Min nTPM: 38.2
Sample A Male 42.9
Sample B Male 38.2
Sample C Female 40.5
Sample D Female 38.7
Hippocampal formation
nTPM: 44.4
Samples: 4

Max nTPM: 49.7
Min nTPM: 39.1
Sample A Male 49.7
Sample B Male 39.1
Sample C Female 41.5
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71492910 Antisense, RP_050913_01_G07, Mouse strain C57BL/6J (56 days, male) 0.0

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