HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.8 nTPM
HPA:17.8 nTPM
GTEx:44.7 nTPM
FANTOM5:11.1 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:90.6 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.8
Sample id Sample description nTPM
Hippocampus
nTPM: 13.7
1898 Male, age 80, left hemisphere 16.7
1855 Male, age 76, left hemisphere 15.2
2148 Female, age 91, left hemisphere 15.2
2621 Female, age 67, right hemisphere 14.5
1911 Female, age 85, right hemisphere 11.1
2529 Female, age 94, left hemisphere 9.2
Dentate gyrus
nTPM: 14.9
2530 Female, age 94, left hemisphere 17.0
2531 Female, age 67, both hemispheres 15.8
1927 Female, age 91, both hemispheres 15.7
2010 Male, age 76, both hemispheres 14.3
2528 Male, age 74, both hemispheres 13.4
2246 Female, age 85, both hemispheres 13.3
Entorhinal gyrus
nTPM: 17.8
2613 Female, age 94, left hemisphere 28.3
2686 Male, age 75, right hemisphere 21.5
2764 Male, age 80, right hemisphere 18.2
1938 Female, age 85, left hemisphere 14.2
1787 Male, age 76, left hemisphere 13.6
2117 Female, age 91, right hemisphere 10.9
Hippocampus, CA1
nTPM: 14.0
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 12.8
2527 Male, age 74, both hemispheres 12.2
2082 Female, age 91, right hemisphere 11.2
Hippocampus, CA2
nTPM: 14.4
1892 Male, age 76, both hemispheres 19.6
1963 Male, age 80, left hemisphere 16.9
2437 Female, age 94, left hemisphere 15.4
1940 Female, age 85, left hemisphere 11.9
2249 Male, age 74, both hemispheres 11.4
2113 Female, age 91, right hemisphere 11.0
Hippocampus, CA3
nTPM: 14.5
2861 Female, age 67, both hemispheres 19.7
2620 Female, age 94, left hemisphere 19.3
1867 Male, age 76, both hemispheres 14.0
2137 Male, age 80, left hemisphere 12.8
1891 Female, age 85, both hemispheres 11.5
2436 Male, age 74, both hemispheres 9.9
Parahippocampal cortex
nTPM: 15.9
2622 Female, age 67, right hemisphere 21.6
2693 Female, age 94, both hemispheres 18.9
2692 Male, age 74, both hemispheres 16.7
1990 Female, age 91, right hemisphere 16.0
1850 Male, age 80, both hemispheres 15.4
1933 Female, age 85, both hemispheres 15.4
2532 Female, age 72, left hemisphere 15.2
2245 Female, age 91, both hemispheres 14.6
2250 Female, age 67, right hemisphere 13.6
2018 Male, age 76, both hemispheres 11.5
Perirhinal gyrus
nTPM: 16.3
1841 Female, age 85, right hemisphere 17.4
1847 Female, age 91, left hemisphere 17.3
1794 Male, age 80, right hemisphere 16.5
2521 Female, age 94, right hemisphere 15.7
2848 Male, age 76, right hemisphere 14.6
Subiculum
nTPM: 12.2
1977 Female, age 85, both hemispheres 14.9
2619 Male, age 74, both hemispheres 13.3
2438 Female, age 94, left hemisphere 12.5
1901 Male, age 80, both hemispheres 11.8
2729 Female, age 91, right hemisphere 10.9
2042 Male, age 76, both hemispheres 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.7
Samples: 197

Max nTPM: 113.7
Min nTPM: 3.3
Std nTPM: 21.3
Median nTPM: 42.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 113.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 101.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 101.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 101.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 96.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 95.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 92.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 87.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 83.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 82.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 81.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.1
FF:10153-102I9 76 years, female 13.8
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.8
Samples: 4

Max nTPM: 46.0
Min nTPM: 31.0
Sample A Female 46.0
Sample B Female 42.9
Sample C Male 31.0
Sample D Male 31.3
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 52.2
Min nTPM: 38.2
Sample A Female 38.2
Sample B Female 41.9
Sample C Male 52.2
Sample D Male 43.1
Subiculum
nTPM: 33.9
Samples: 4

Max nTPM: 43.9
Min nTPM: 28.3
Sample A Female 43.9
Sample B Female 28.3
Sample C Male 35.0
Sample D Male 28.5
Ventral hippocampus
nTPM: 39.6
Samples: 4

Max nTPM: 51.0
Min nTPM: 24.3
Sample A Female 36.6
Sample B Female 24.3
Sample C Male 51.0
Sample D Male 46.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 101.7
Min nTPM: 80.8
Sample A Male 80.8
Sample B Male 85.2
Sample C Female 86.6
Sample D Female 101.7
Hippocampal formation
nTPM: 90.6
Samples: 4

Max nTPM: 94.7
Min nTPM: 89.0
Sample A Male 89.2
Sample B Male 89.0
Sample C Female 94.7
Sample D Female 89.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
71380550 Antisense, RP_050419_04_G06, Mouse strain C57BL/6J (56 days, male) 13.1
76097701 Antisense, RP_060620_02_A06, Mouse strain C57BL/6J (56 days, male) 10.6

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