HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.8 nTPM
HPA:36.8 nTPM
GTEx:49.2 nTPM
FANTOM5:9.3 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:30.0 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018403
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.8
1898 Male, age 80, left hemisphere 38.4
2529 Female, age 94, left hemisphere 38.1
1911 Female, age 85, right hemisphere 36.6
1855 Male, age 76, left hemisphere 36.1
2621 Female, age 67, right hemisphere 35.8
2148 Female, age 91, left hemisphere 35.7
Dentate gyrus
nTPM: 34.8
2010 Male, age 76, both hemispheres 37.5
2530 Female, age 94, left hemisphere 37.4
1927 Female, age 91, both hemispheres 34.6
2246 Female, age 85, both hemispheres 34.3
2528 Male, age 74, both hemispheres 33.5
2531 Female, age 67, both hemispheres 31.9
Entorhinal gyrus
nTPM: 35.0
2117 Female, age 91, right hemisphere 38.5
1938 Female, age 85, left hemisphere 35.9
1787 Male, age 76, left hemisphere 35.4
2764 Male, age 80, right hemisphere 35.3
2686 Male, age 75, right hemisphere 34.5
2613 Female, age 94, left hemisphere 30.7
Hippocampus, CA1
nTPM: 36.5
2749 Male, age 80, left hemisphere 40.0
1873 Female, age 85, both hemispheres 36.9
2527 Male, age 74, both hemispheres 36.5
2045 Male, age 76, both hemispheres 36.0
2082 Female, age 91, right hemisphere 33.0
Hippocampus, CA2
nTPM: 35.3
1963 Male, age 80, left hemisphere 38.5
1892 Male, age 76, both hemispheres 37.8
2249 Male, age 74, both hemispheres 36.8
2113 Female, age 91, right hemisphere 34.1
1940 Female, age 85, left hemisphere 33.2
2437 Female, age 94, left hemisphere 31.2
Hippocampus, CA3
nTPM: 34.5
2137 Male, age 80, left hemisphere 38.4
1867 Male, age 76, both hemispheres 37.1
1891 Female, age 85, both hemispheres 35.9
2436 Male, age 74, both hemispheres 33.1
2861 Female, age 67, both hemispheres 31.7
2620 Female, age 94, left hemisphere 30.5
Parahippocampal cortex
nTPM: 34.9
2018 Male, age 76, both hemispheres 37.1
1850 Male, age 80, both hemispheres 36.7
2250 Female, age 67, right hemisphere 35.7
1933 Female, age 85, both hemispheres 35.5
2692 Male, age 74, both hemispheres 35.2
2245 Female, age 91, both hemispheres 35.0
2532 Female, age 72, left hemisphere 35.0
1990 Female, age 91, right hemisphere 33.2
2622 Female, age 67, right hemisphere 33.2
2693 Female, age 94, both hemispheres 32.5
Perirhinal gyrus
nTPM: 35.2
1794 Male, age 80, right hemisphere 36.5
1847 Female, age 91, left hemisphere 35.8
1841 Female, age 85, right hemisphere 35.4
2848 Male, age 76, right hemisphere 34.8
2521 Female, age 94, right hemisphere 33.5
Subiculum
nTPM: 36.5
1901 Male, age 80, both hemispheres 39.0
2042 Male, age 76, both hemispheres 37.1
1977 Female, age 85, both hemispheres 36.8
2438 Female, age 94, left hemisphere 36.7
2619 Male, age 74, both hemispheres 35.2
2729 Female, age 91, right hemisphere 34.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.2
Samples: 197

Max nTPM: 103.8
Min nTPM: 26.0
Std nTPM: 9.6
Median nTPM: 48.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 103.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 100.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 76.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 74.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 69.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 68.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 68.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 66.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 64.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 62.7
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 62.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.3
FF:10169-103B7 60 years, female 9.4
FF:10153-102I9 76 years, female 9.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.0
Sample A Female 25.3
Sample B Female 19.8
Sample C Male 21.9
Sample D Male 18.0
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 16.4
Sample A Female 19.2
Sample B Female 19.3
Sample C Male 18.1
Sample D Male 16.4
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 26.1
Min nTPM: 16.2
Sample A Female 26.1
Sample B Female 16.4
Sample C Male 16.2
Sample D Male 17.6
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.5
Sample A Female 18.2
Sample B Female 16.5
Sample C Male 19.1
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.0
Sample A Male 27.0
Sample B Male 28.4
Sample C Female 29.4
Sample D Female 31.7
Hippocampal formation
nTPM: 30.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 29.4
Sample A Male 29.4
Sample B Male 30.4
Sample C Female 30.5
Sample D Female 29.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
68844379 Antisense, RP_050222_01_E04, Mouse strain C57BL/6J (56 days, male) 5.2

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