HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:103.4 nTPM
HPA:103.4 nTPM
GTEx:74.7 nTPM
FANTOM5:33.8 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:43.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 103.4
Sample id Sample description nTPM
Hippocampus
nTPM: 97.9
2148 Female, age 91, left hemisphere 100.2
1898 Male, age 80, left hemisphere 100.1
1911 Female, age 85, right hemisphere 98.4
2621 Female, age 67, right hemisphere 98.3
2529 Female, age 94, left hemisphere 97.3
1855 Male, age 76, left hemisphere 93.2
Dentate gyrus
nTPM: 99.2
2531 Female, age 67, both hemispheres 104.5
1927 Female, age 91, both hemispheres 103.5
2530 Female, age 94, left hemisphere 101.0
2246 Female, age 85, both hemispheres 96.9
2528 Male, age 74, both hemispheres 96.4
2010 Male, age 76, both hemispheres 92.9
Entorhinal gyrus
nTPM: 97.8
2764 Male, age 80, right hemisphere 102.6
2613 Female, age 94, left hemisphere 102.3
2686 Male, age 75, right hemisphere 101.7
1787 Male, age 76, left hemisphere 95.2
1938 Female, age 85, left hemisphere 94.6
2117 Female, age 91, right hemisphere 90.6
Hippocampus, CA1
nTPM: 99.9
2749 Male, age 80, left hemisphere 119.8
1873 Female, age 85, both hemispheres 97.2
2082 Female, age 91, right hemisphere 95.0
2527 Male, age 74, both hemispheres 94.9
2045 Male, age 76, both hemispheres 92.7
Hippocampus, CA2
nTPM: 96.6
1963 Male, age 80, left hemisphere 102.8
2437 Female, age 94, left hemisphere 100.6
1892 Male, age 76, both hemispheres 96.0
1940 Female, age 85, left hemisphere 93.9
2113 Female, age 91, right hemisphere 93.3
2249 Male, age 74, both hemispheres 93.0
Hippocampus, CA3
nTPM: 103.4
2137 Male, age 80, left hemisphere 116.2
2861 Female, age 67, both hemispheres 111.0
2620 Female, age 94, left hemisphere 107.1
1867 Male, age 76, both hemispheres 98.8
1891 Female, age 85, both hemispheres 96.4
2436 Male, age 74, both hemispheres 91.2
Parahippocampal cortex
nTPM: 95.3
2692 Male, age 74, both hemispheres 101.3
2622 Female, age 67, right hemisphere 97.7
2245 Female, age 91, both hemispheres 97.2
2693 Female, age 94, both hemispheres 97.1
1850 Male, age 80, both hemispheres 95.7
1990 Female, age 91, right hemisphere 95.0
1933 Female, age 85, both hemispheres 94.3
2532 Female, age 72, left hemisphere 93.0
2018 Male, age 76, both hemispheres 92.8
2250 Female, age 67, right hemisphere 89.2
Perirhinal gyrus
nTPM: 94.3
1794 Male, age 80, right hemisphere 97.6
1847 Female, age 91, left hemisphere 97.2
2521 Female, age 94, right hemisphere 95.6
1841 Female, age 85, right hemisphere 91.7
2848 Male, age 76, right hemisphere 89.3
Subiculum
nTPM: 97.9
1901 Male, age 80, both hemispheres 105.2
2042 Male, age 76, both hemispheres 100.6
2619 Male, age 74, both hemispheres 96.5
2438 Female, age 94, left hemisphere 96.2
2729 Female, age 91, right hemisphere 95.1
1977 Female, age 85, both hemispheres 94.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.7
Samples: 197

Max nTPM: 161.7
Min nTPM: 29.1
Std nTPM: 23.4
Median nTPM: 70.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 161.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 150.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 141.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 140.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 128.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 125.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 122.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 122.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 120.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 120.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 119.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.8
FF:10153-102I9 76 years, female 37.2
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 39.9
Min nTPM: 27.4
Sample A Female 39.9
Sample B Female 34.8
Sample C Male 27.4
Sample D Male 31.4
Entorhinal cortex
nTPM: 32.6
Samples: 4

Max nTPM: 37.8
Min nTPM: 27.0
Sample A Female 29.4
Sample B Female 36.0
Sample C Male 37.8
Sample D Male 27.0
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 25.9
Sample A Female 36.7
Sample B Female 27.6
Sample C Male 30.7
Sample D Male 25.9
Ventral hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 37.9
Min nTPM: 26.3
Sample A Female 27.4
Sample B Female 26.3
Sample C Male 37.9
Sample D Male 35.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 44.7
Min nTPM: 41.9
Sample A Male 41.9
Sample B Male 44.7
Sample C Female 42.5
Sample D Female 42.9
Hippocampal formation
nTPM: 40.8
Samples: 4

Max nTPM: 43.2
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 41.7
Sample C Female 41.2
Sample D Female 43.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
67815539 Antisense, RP_040920_01_G09, Mouse strain C57BL/6J (56 days, male) 4.4

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