AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		68.865
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:87.5 nTPM
HPA:87.5 nTPM
GTEx:52.5 nTPM
FANTOM5:146.7 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:22.4 nTPM
Allen mouse:2.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA015979
Amygdala mean intensity 68.865
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 31.855
Basal medial amygdaloid nucleus 49.432
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 23.912
Cortical amygdala 68.865
Central amygdala 32.288
Medial amygdaloid nucleus 41.175

AMYGDALA - HPA Brain RNA-seq
Max nTPM 87.5
Sample id Sample description nTPM
Amygdala
nTPM: 33.4
1987 Female, age 91, left hemisphere 86.5
2517 Female, age 94, left hemisphere 49.2
2514 Male, age 75, right hemisphere 16.3
2695 Female, age 67, right hemisphere 15.1
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 42.6
2243 Female, age 91, right hemisphere 83.2
2685 Female, age 94, left hemisphere 61.6
2110 Male, age 80, left hemisphere 44.5
2827 Female, age 67, right hemisphere 27.5
1955 Male, age 76, both hemispheres 26.1
2609 Male, age 75, right hemisphere 12.6
Central amygdala
nTPM: 45.4
2701 Female, age 91, right hemisphere 92.7
2239 Male, age 80, left hemisphere 71.1
2826 Female, age 94, left hemisphere 37.3
2515 Male, age 75, right hemisphere 25.8
1905 Male, age 76, both hemispheres 0.0
Corticomedial amygdala
nTPM: 56.4
2242 Female, age 91, right hemisphere 105.6
2429 Female, age 94, left hemisphere 68.7
2829 Male, age 80, left hemisphere 68.5
2535 Female, age 67, right hemisphere 57.3
2240 Male, age 76, both hemispheres 25.6
2428 Male, age 75, right hemisphere 12.5
Lateral amygdala
nTPM: 41.2
2255 Female, age 91, right hemisphere 98.0
2256 Male, age 80, left hemisphere 50.5
2534 Female, age 94, left hemisphere 47.3
1883 Male, age 76, both hemispheres 21.4
2830 Female, age 67, right hemisphere 16.4
2516 Male, age 75, right hemisphere 13.8
Stria terminalis, bed nucleus
nTPM: 87.5
2201 Male, age 74, unknown 110.9
1974 Female, age 91, both hemispheres 78.9
2486 Female, age 94, both hemispheres 72.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 52.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 52.5
Samples: 152

Max nTPM: 128.3
Min nTPM: 3.7
Std nTPM: 23.9
Median nTPM: 50.4
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 128.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 126.3
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 115.4
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 113.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 102.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 102.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 98.6
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 94.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 92.0
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 91.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 90.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 146.7
FF:10151-102I7 76 years, female 146.7

AMYGDALA - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Amygdala
nTPM: 8.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.6
Sample A Female 8.6
Sample B Female 9.9
Sample C Male 5.6
Sample D Male 8.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 22.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 22.4
Samples: 4

Max nTPM: 32.5
Min nTPM: 15.1
Sample A Male 32.5
Sample B Male 17.5
Sample C Female 15.1
Sample D Female 24.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.2
70795349 Antisense, RP_050712_01_D04, Mouse strain C57BL/6J (56 days, male) 3.7
74735337 Antisense, RP_060302_01_E02, Mouse strain C57BL/6J (56 days, male) 2.6
75081206 Antisense, RP_060315_03_C11, Mouse strain C57BL/6J (56 days, male) 2.2
71924504 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 2.0
72338724 Antisense, RP_051101_01_C06, Mouse strain C57BL/6J (56 days, male) 1.7
70298477 Antisense, RP_050602_02_H03, Mouse strain C57BL/6J (56 days, male) 0.8
70722898 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 0.7

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.