HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		75.884
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.7 nTPM
HPA:60.7 nTPM
GTEx:38.3 nTPM
FANTOM5:75.8 Scaled Tags Per Million
Pig:10.8 nTPM
Mouse:3.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015627
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA015979
Hippocampal formation mean intensity 75.884
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 16.530
Molecular layer of the dentate gyrus 15.131
Granular dentate gyrus 12.225
CA1 - oriens layer 15.886
CA1 - pyramidal layer 14.872
CA1 - radiatum layer 17.746
CA2 - oriens layer 20.292
CA2 - pyramidal layer 15.155
CA2 - radiatum layer 20.325
CA3 - oriens layer 26.134
CA3 - pyramidal layer 18.977
CA3 - radiatum layer 28.652
Stratum lucidum 16.507
Lacunosum moleculare 13.983
Subiculum 55.034

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.9
1898 Male, age 80, left hemisphere 41.1
2621 Female, age 67, right hemisphere 28.1
1855 Male, age 76, left hemisphere 26.3
2148 Female, age 91, left hemisphere 24.1
2529 Female, age 94, left hemisphere 19.5
1911 Female, age 85, right hemisphere 16.3
Dentate gyrus
nTPM: 34.1
2246 Female, age 85, both hemispheres 45.6
2528 Male, age 74, both hemispheres 41.3
2531 Female, age 67, both hemispheres 37.7
2010 Male, age 76, both hemispheres 32.1
2530 Female, age 94, left hemisphere 24.7
1927 Female, age 91, both hemispheres 22.9
Entorhinal gyrus
nTPM: 59.5
2613 Female, age 94, left hemisphere 100.8
2764 Male, age 80, right hemisphere 69.0
1938 Female, age 85, left hemisphere 64.5
1787 Male, age 76, left hemisphere 56.0
2686 Male, age 75, right hemisphere 33.6
2117 Female, age 91, right hemisphere 33.0
Hippocampus, CA1
nTPM: 36.3
2082 Female, age 91, right hemisphere 71.9
2527 Male, age 74, both hemispheres 35.9
2045 Male, age 76, both hemispheres 27.6
1873 Female, age 85, both hemispheres 24.9
2749 Male, age 80, left hemisphere 21.1
Hippocampus, CA2
nTPM: 34.8
2113 Female, age 91, right hemisphere 47.2
1940 Female, age 85, left hemisphere 40.9
2249 Male, age 74, both hemispheres 40.3
2437 Female, age 94, left hemisphere 37.4
1963 Male, age 80, left hemisphere 27.6
1892 Male, age 76, both hemispheres 15.2
Hippocampus, CA3
nTPM: 21.2
2861 Female, age 67, both hemispheres 39.9
2436 Male, age 74, both hemispheres 27.8
1891 Female, age 85, both hemispheres 22.4
2620 Female, age 94, left hemisphere 16.0
2137 Male, age 80, left hemisphere 14.6
1867 Male, age 76, both hemispheres 6.9
Parahippocampal cortex
nTPM: 44.1
1933 Female, age 85, both hemispheres 59.2
1990 Female, age 91, right hemisphere 56.2
2693 Female, age 94, both hemispheres 49.0
2250 Female, age 67, right hemisphere 48.4
2692 Male, age 74, both hemispheres 47.1
2245 Female, age 91, both hemispheres 45.7
1850 Male, age 80, both hemispheres 42.6
2622 Female, age 67, right hemisphere 35.7
2532 Female, age 72, left hemisphere 30.9
2018 Male, age 76, both hemispheres 26.0
Perirhinal gyrus
nTPM: 60.7
1847 Female, age 91, left hemisphere 89.3
2848 Male, age 76, right hemisphere 57.8
2521 Female, age 94, right hemisphere 56.6
1841 Female, age 85, right hemisphere 50.2
1794 Male, age 80, right hemisphere 49.5
Subiculum
nTPM: 32.1
1977 Female, age 85, both hemispheres 57.0
2619 Male, age 74, both hemispheres 44.5
2438 Female, age 94, left hemisphere 31.1
2729 Female, age 91, right hemisphere 25.4
1901 Male, age 80, both hemispheres 20.2
2042 Male, age 76, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.3
Samples: 197

Max nTPM: 142.3
Min nTPM: 2.8
Std nTPM: 22.5
Median nTPM: 35.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 142.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 108.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 97.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 96.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 96.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 90.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 89.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 87.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 87.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 85.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 83.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.8
FF:10153-102I9 76 years, female 100.3
FF:10169-103B7 60 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.0
Sample A Female 3.9
Sample B Female 3.5
Sample C Male 4.5
Sample D Male 2.0
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 4.0
Sample C Male 5.9
Sample D Male 4.0
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 15.3
Min nTPM: 6.4
Sample A Female 15.3
Sample B Female 11.0
Sample C Male 10.4
Sample D Male 6.4
Ventral hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 8.7
Min nTPM: 3.1
Sample A Female 4.0
Sample B Female 4.3
Sample C Male 8.7
Sample D Male 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 4.6
Min nTPM: 1.5
Sample A Male 1.5
Sample B Male 1.7
Sample C Female 4.1
Sample D Female 4.6
Hippocampal formation
nTPM: 2.3
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.0
Sample A Male 2.7
Sample B Male 2.1
Sample C Female 1.0
Sample D Female 3.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70795349 Antisense, RP_050712_01_D04, Mouse strain C57BL/6J (56 days, male) 0.5
74735337 Antisense, RP_060302_01_E02, Mouse strain C57BL/6J (56 days, male) 0.4
75081206 Antisense, RP_060315_03_C11, Mouse strain C57BL/6J (56 days, male) 0.3
70722898 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 0.3
71924504 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 0.2
72338724 Antisense, RP_051101_01_C06, Mouse strain C57BL/6J (56 days, male) 0.1
70298477 Antisense, RP_050602_02_H03, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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