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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:86.9 nTPM
HPA:86.9 nTPM
GTEx:46.4 nTPM
FANTOM5:77.2 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:49.4 nTPM
Allen mouse:3.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA015627
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 86.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 5.4
2288 Male, age 75, left hemisphere 15.1
2289 Male, age 61, right hemisphere 11.5
1781 Male, age 74, unknown 10.5
2481 Female, age 94, left hemisphere 3.7
2290 Female, age 72, unknown 2.6
1854 Male, age 80, left hemisphere 0.0
1857 Female, age 85, left hemisphere 0.0
2846 Female, age 79, unknown 0.0
Claustrum
nTPM: 25.4
2284 Female, age 91, both hemispheres 37.2
2568 Male, age 61, both hemispheres 31.0
2392 Female, age 94, both hemispheres 29.8
2491 Male, age 75, both hemispheres 27.6
2645 Female, age 72, unknown 26.8
2198 Male, age 80, both hemispheres 25.8
2292 Female, age 85, both hemispheres 18.7
1956 Male, age 74, unknown 17.4
2196 Female, age 79, unknown 14.3
Globus pallidus, externus
nTPM: 4.9
1996 Male, age 80, right hemisphere 6.8
2395 Male, age 75, both hemispheres 5.5
2772 Female, age 79, unknown 4.7
2567 Female, age 72, unknown 4.3
2646 Male, age 61, right hemisphere 3.4
Globus pallidus, internus
nTPM: 4.0
2287 Male, age 75, right hemisphere 11.6
2566 Female, age 72, unknown 10.4
2037 Male, age 80, right hemisphere 3.9
1818 Male, age 74, unknown 0.9
2778 Female, age 91, both hemispheres 0.8
2111 Female, age 85, right hemisphere 0.6
2483 Female, age 94, right hemisphere 0.0
Nucleus accumbens
nTPM: 14.9
2732 Male, age 80, right hemisphere 53.4
1856 Female, age 91, right hemisphere 21.2
2824 Male, age 61, right hemisphere 11.3
2698 Female, age 72, unknown 10.1
2286 Male, age 75, left hemisphere 9.7
1783 Male, age 74, unknown 7.2
2391 Female, age 94, left hemisphere 3.1
1806 Female, age 85, left hemisphere 2.9
Nucleus basalis of Meynert
nTPM: 1.0
2569 Male, age 61, both hemispheres 2.7
2821 Male, age 75, both hemispheres 1.3
2393 Male, age 80, right hemisphere 0.0
2484 Female, age 94, left hemisphere 0.0
Nucleus of the diagonal band
nTPM: 86.9
1979 Male, age 74, unknown 120.6
2195 Female, age 85, both hemispheres 91.5
2775 Male, age 80, right hemisphere 82.9
1812 Female, age 91, both hemispheres 78.3
2029 Male, age 61, right hemisphere 61.4
Olfactory tubercle
nTPM: 61.5
2487 Female, age 94, left hemisphere 82.1
1998 Female, age 91, both hemispheres 79.3
1846 Male, age 80, right hemisphere 54.0
2856 Male, age 75, right hemisphere 30.9
Putamen
nTPM: 4.1
2647 Male, age 75, left hemisphere 17.0
2489 Female, age 72, unknown 5.5
2482 Female, age 94, left hemisphere 5.4
1937 Female, age 91, right hemisphere 0.9
2466 Female, age 79, unknown 0.3
1829 Male, age 74, unknown 0.0
1838 Male, age 80, right hemisphere 0.0
Septal nuclei
nTPM: 69.7
2009 Female, age 91, both hemispheres 94.3
2059 Female, age 85, both hemispheres 78.3
1960 Male, age 74, unknown 76.9
2199 Male, age 80, right hemisphere 68.1
2031 Female, age 72, unknown 58.7
2629 Female, age 94, right hemisphere 56.8
2394 Male, age 61, left hemisphere 54.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 20.2
Samples: 246

Max nTPM: 118.5
Min nTPM: 2.4
Std nTPM: 18.9
Median nTPM: 14.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 118.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 106.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 103.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 98.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 95.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 71.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 71.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 70.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 70.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 68.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 50.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 49.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 48.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 48.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 45.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 45.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 41.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 40.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 39.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 38.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 38.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 37.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 37.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 37.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 33.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 32.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 32.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 31.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 31.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 30.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 30.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 29.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 29.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 29.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 29.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 27.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 27.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 27.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 27.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 27.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 26.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 26.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 26.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 26.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 26.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 26.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 25.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 25.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 25.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 24.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 24.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 24.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 24.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 23.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 23.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 23.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 23.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 23.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 23.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 23.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 23.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 22.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 22.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 22.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 21.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 21.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 21.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 21.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 21.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 21.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 21.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 20.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 20.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 20.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 20.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 19.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 19.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 19.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 19.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 19.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 18.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 18.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 18.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 18.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 18.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 18.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 17.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 17.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 17.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 17.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 17.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 16.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 16.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 16.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 16.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 16.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 16.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 16.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 15.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 15.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 15.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 15.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 15.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 15.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 14.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 14.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 14.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 14.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 14.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 14.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 14.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 14.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 14.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 14.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 14.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 14.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 14.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 13.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 13.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 13.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 13.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 13.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 12.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 12.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 12.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 12.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 12.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 12.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 12.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 12.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 11.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 11.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 11.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 11.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 11.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 11.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 11.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 11.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 10.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 10.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 10.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 10.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 10.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 10.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 10.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 10.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 10.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 10.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 10.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 10.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 10.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 9.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 9.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 9.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 9.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 9.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 9.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 9.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 8.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 8.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 8.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 7.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 7.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 7.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 7.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 7.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 7.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 7.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 7.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 7.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 7.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 7.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 6.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 6.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 6.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 6.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 6.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 6.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 6.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 5.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 5.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 5.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 5.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 5.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 5.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 5.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 5.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 5.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 4.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 4.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 4.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 4.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 4.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 4.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 4.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 4.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 3.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 3.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 3.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 3.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 3.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 3.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 3.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 3.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 3.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 2.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 2.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 46.4
Samples: 246

Max nTPM: 311.7
Min nTPM: 1.1
Std nTPM: 34.6
Median nTPM: 40.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 311.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 150.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 135.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 134.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 126.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 124.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 122.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 117.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 111.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 109.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 105.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 105.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 105.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 101.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 100.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 99.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 96.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 96.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 95.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 95.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 94.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 91.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 91.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 90.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 90.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 89.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 87.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 87.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 87.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 87.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 85.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 85.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 85.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 82.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 82.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 82.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 81.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 79.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 78.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 77.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 77.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 75.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 74.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 74.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 73.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 73.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 73.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 73.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 72.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 71.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 70.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 69.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 69.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 68.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 68.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 67.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 63.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 63.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 63.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 62.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 61.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 61.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 59.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 58.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 57.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 57.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 57.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 56.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 56.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 55.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 55.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 55.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 55.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 53.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 53.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 53.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 52.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 52.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 52.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 51.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 51.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 51.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 51.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 51.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 50.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 49.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 49.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 48.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 48.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 48.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 48.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 48.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 48.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 47.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 47.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 46.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 46.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 46.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 46.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 46.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 46.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 46.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 45.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 45.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 45.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 44.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 44.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 44.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 43.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 43.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 43.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 43.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 42.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 40.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 40.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 39.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 39.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 39.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 39.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 38.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 37.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 37.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 36.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 35.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 35.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 35.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 35.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 34.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 34.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 34.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 34.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 33.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 33.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 33.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 32.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 31.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 31.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 31.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 31.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 31.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 30.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 30.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 29.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 29.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 29.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 29.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 29.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 29.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 28.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 28.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 28.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 28.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 28.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 26.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 26.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 25.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 24.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 24.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 24.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 24.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 24.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 24.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 23.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 23.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 23.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 23.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 23.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 23.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 22.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 22.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 22.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 22.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 22.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 22.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 22.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 21.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 20.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 19.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 19.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 19.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 19.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 18.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 17.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 17.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 17.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 17.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 17.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 17.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 17.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 16.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 15.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 15.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 15.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 14.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 14.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 14.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 14.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 13.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 13.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 13.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 13.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 13.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 12.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 11.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 11.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 11.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 10.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 10.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 10.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 9.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 9.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 9.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 9.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 9.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 8.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 8.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 8.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 7.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 7.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 6.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 6.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 5.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 5.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 4.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 4.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 3.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 3.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1.1
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Brain - Putamen (basal ganglia)
Average nTPM: 10.8
Samples: 205

Max nTPM: 35.9
Min nTPM: 1.7
Std nTPM: 6.7
Median nTPM: 9.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 35.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 30.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 28.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 28.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 27.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 26.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 26.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 25.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 25.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 24.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 24.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 23.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 23.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 22.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 22.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 21.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 21.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 20.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 20.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 19.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 19.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 18.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 18.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 18.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 18.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 18.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 18.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 17.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 17.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 17.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 16.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 16.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 16.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 16.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 16.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 15.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 15.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 15.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 15.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 15.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 15.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 15.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 14.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 14.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 14.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 14.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 14.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 14.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 14.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 14.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 14.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 14.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 14.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 14.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 13.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 13.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 13.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 13.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 13.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 13.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 13.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 13.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 12.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 12.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 11.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 11.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 11.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 11.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 11.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 11.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 11.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 11.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 11.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 11.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 11.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 11.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 10.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 10.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 9.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 9.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 9.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 9.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 9.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 9.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 9.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 9.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 8.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 8.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 8.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 8.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 7.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 7.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 7.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 7.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 7.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 7.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 7.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 6.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 6.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 6.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 6.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 6.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 6.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 6.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 6.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 6.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 6.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 6.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 5.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 5.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 5.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 5.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 5.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 5.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 5.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 5.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 4.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 4.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 4.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 4.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 4.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 4.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 4.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 4.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 3.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 3.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 3.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 3.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 3.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 3.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 3.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 3.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 3.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 3.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 3.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 3.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 3.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 2.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 2.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 2.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 2.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 2.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 2.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 2.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 2.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 68.3
FF:10164-103B2 76 years, female 68.3
Globus pallidus
Scaled Tags Per Million: 13.0
FF:10161-103A8 76 years, female 16.6
FF:10175-103C4 60 years, female 9.4
Nucleus accumbens
Scaled Tags Per Million: 77.2
FF:10037-101F1 23-56 years, mixed 77.2
Putamen
Scaled Tags Per Million: 59.4
FF:10176-103C5 60 years, female 59.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 19.3
Pig sample Sample description nTPM
Caudate
nTPM: 6.8
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.2
Sample A Female 7.8
Sample B Female 8.3
Sample C Male 5.7
Sample D Male 5.2
Putamen
nTPM: 4.2
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.7
Sample A Female 4.4
Sample B Female 3.7
Sample C Male 3.9
Sample D Male 4.6
Septum
nTPM: 19.3
Samples: 4

Max nTPM: 42.4
Min nTPM: 9.2
Sample A Female 14.4
Sample B Female 11.1
Sample C Male 42.4
Sample D Male 9.2
Ventral pallidum
nTPM: 7.1
Samples: 4

Max nTPM: 11.3
Min nTPM: 4.6
Sample A Female 6.5
Sample B Female 4.6
Sample C Male 11.3
Sample D Male 6.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 49.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.2
Samples: 4

Max nTPM: 9.8
Min nTPM: 5.2
Sample A Male 5.2
Sample B Male 9.8
Sample C Female 5.5
Sample D Female 8.3
Septum
nTPM: 49.4
Samples: 4

Max nTPM: 73.0
Min nTPM: 34.7
Sample A Male 73.0
Sample B Male 35.3
Sample C Female 34.7
Sample D Female 54.5
Ventral forebrain
nTPM: 19.8
Samples: 4

Max nTPM: 31.8
Min nTPM: 13.7
Sample A Male 13.7
Sample B Male 31.8
Sample C Female 17.3
Sample D Female 16.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
74735337 Antisense, RP_060302_01_E02, Mouse strain C57BL/6J (56 days, male) 2.2
70795349 Antisense, RP_050712_01_D04, Mouse strain C57BL/6J (56 days, male) 2.1
71924504 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 1.8
75081206 Antisense, RP_060315_03_C11, Mouse strain C57BL/6J (56 days, male) 1.6
72338724 Antisense, RP_051101_01_C06, Mouse strain C57BL/6J (56 days, male) 1.0
70722898 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 1.0
70298477 Antisense, RP_050602_02_H03, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 3.8
70795349 Antisense, RP_050712_01_D04, Mouse strain C57BL/6J (56 days, male) 5.3
74735337 Antisense, RP_060302_01_E02, Mouse strain C57BL/6J (56 days, male) 4.7
71924504 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 4.3
75081206 Antisense, RP_060315_03_C11, Mouse strain C57BL/6J (56 days, male) 4.0
72338724 Antisense, RP_051101_01_C06, Mouse strain C57BL/6J (56 days, male) 3.3
70722898 Antisense, RP_050630_03_D11, Mouse strain C57BL/6J (56 days, male) 2.0
70298477 Antisense, RP_050602_02_H03, Mouse strain C57BL/6J (56 days, male) 1.2

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