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  • PSMB1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:123.8 nTPM
FANTOM5:175.8 Scaled Tags Per Million
Pig:74.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029635Antibody HPA029637Antibody CAB033911
Glial cells Not detectedLowNot detected
Neuronal cells MediumMediumLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 123.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 123.8
Samples: 246

Max nTPM: 225.0
Min nTPM: 69.4
Std nTPM: 25.4
Median nTPM: 119.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 225.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 220.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 214.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 199.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 194.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 191.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 187.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 186.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 179.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 178.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 177.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 175.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 174.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 172.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 172.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 171.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 167.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 162.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 161.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 160.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 159.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 158.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 155.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 155.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 154.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 154.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 152.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 152.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 152.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 150.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 150.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 149.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 149.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 149.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 149.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 148.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 147.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 147.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 147.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 146.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 146.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 145.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 145.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 144.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 144.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 144.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 143.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 142.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 142.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 142.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 141.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 139.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 139.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 137.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 137.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 137.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 137.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 137.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 136.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 136.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 136.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 135.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 135.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 135.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 134.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 133.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 132.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 132.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 132.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 131.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 131.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 131.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 131.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 130.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 130.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 130.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 129.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 129.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 128.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 128.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 128.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 128.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 128.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 128.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 128.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 127.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 127.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 127.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 127.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 127.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 126.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 126.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 126.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 126.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 126.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 125.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 125.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 124.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 124.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 123.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 123.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 122.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 122.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 122.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 122.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 122.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 122.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 121.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 121.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 121.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 120.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 120.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 120.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 120.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 119.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 119.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 119.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 119.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 119.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 118.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 118.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 117.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 117.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 117.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 117.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 117.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 117.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 117.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 116.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 116.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 115.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 115.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 115.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 115.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 114.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 114.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 114.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 114.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 114.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 113.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 113.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 113.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 113.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 112.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 112.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 112.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 112.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 111.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 111.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 111.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 111.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 110.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 110.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 110.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 110.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 110.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 110.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 109.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 109.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 109.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 109.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 109.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 109.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 108.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 108.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 108.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 107.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 107.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 107.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 107.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 107.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 106.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 106.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 106.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 106.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 106.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 105.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 105.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 105.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 105.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 104.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 104.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 104.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 104.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 104.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 104.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 103.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 102.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 101.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 101.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 100.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 100.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 100.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 100.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 100.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 100.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 100.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 99.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 99.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 98.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 98.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 97.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 96.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 96.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 95.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 95.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 94.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 94.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 93.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 93.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 92.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 91.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 91.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 90.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 89.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 88.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 88.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 87.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 87.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 85.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 84.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 83.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 81.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 69.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 175.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 175.8
FF:10164-103B2 76 years, female 175.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 74.6
Pig sample Sample description nTPM
Caudate
nTPM: 74.6
Samples: 4

Max nTPM: 84.6
Min nTPM: 60.6
Sample A Female 72.7
Sample B Female 80.6
Sample C Male 84.6
Sample D Male 60.6

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