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GABARAPL2
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TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:269.1 nTPM
HPA:269.1 nTPM
GTEx:345.9 nTPM
FANTOM5:140.1 Scaled Tags Per Million
Pig:145.2 nTPM
Mouse:165.0 nTPM
Allen mouse:6.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 269.1
Sample id Sample description nTPM
Amygdala
nTPM: 269.1
2814 Male, age 76, right hemisphere 292.4
2514 Male, age 75, right hemisphere 275.0
1987 Female, age 91, left hemisphere 267.1
2695 Female, age 67, right hemisphere 261.2
2517 Female, age 94, left hemisphere 249.6
Basal amygdala
nTPM: 246.2
2609 Male, age 75, right hemisphere 264.0
1955 Male, age 76, both hemispheres 260.3
2110 Male, age 80, left hemisphere 253.6
2685 Female, age 94, left hemisphere 241.1
2243 Female, age 91, right hemisphere 233.7
2827 Female, age 67, right hemisphere 224.6
Central amygdala
nTPM: 259.5
1905 Male, age 76, both hemispheres 289.8
2515 Male, age 75, right hemisphere 264.3
2826 Female, age 94, left hemisphere 252.9
2701 Female, age 91, right hemisphere 248.9
2239 Male, age 80, left hemisphere 241.5
Corticomedial amygdala
nTPM: 249.5
2428 Male, age 75, right hemisphere 278.1
2829 Male, age 80, left hemisphere 259.0
2429 Female, age 94, left hemisphere 250.6
2240 Male, age 76, both hemispheres 245.3
2242 Female, age 91, right hemisphere 242.7
2535 Female, age 67, right hemisphere 221.1
Lateral amygdala
nTPM: 247.9
1883 Male, age 76, both hemispheres 278.7
2516 Male, age 75, right hemisphere 270.0
2534 Female, age 94, left hemisphere 241.0
2255 Female, age 91, right hemisphere 237.0
2256 Male, age 80, left hemisphere 233.0
2830 Female, age 67, right hemisphere 227.9
Stria terminalis, bed nucleus
nTPM: 250.3
1974 Female, age 91, both hemispheres 258.1
2201 Male, age 74, unknown 247.8
2486 Female, age 94, both hemispheres 245.1

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 345.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 345.9
Samples: 152

Max nTPM: 1011.2
Min nTPM: 175.8
Std nTPM: 109.5
Median nTPM: 328.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 1011.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 772.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 713.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 676.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 655.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 626.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 621.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 619.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 565.8
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 505.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 496.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 481.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 463.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 449.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 447.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 447.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 430.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 422.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 413.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 412.2
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 403.2
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 400.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 395.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 394.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 393.9
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 393.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 393.5
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 385.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 385.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 383.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 381.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 374.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 372.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 370.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 369.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 369.5
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 367.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 366.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 365.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 363.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 362.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 361.4
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 361.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 360.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 359.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 359.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 357.5
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 357.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 356.6
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 356.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 354.9
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 352.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 352.0
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 349.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 348.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 348.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 347.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 347.1
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 346.6
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 344.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 343.0
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 342.6
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 341.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 341.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 339.4
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 336.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 336.2
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 334.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 334.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 334.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 334.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 334.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 332.4
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 332.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 329.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 328.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 327.5
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 327.2
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 327.2
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 326.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 324.1
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 323.7
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 322.5
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 321.6
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 319.2
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 317.5
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 316.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 315.7
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 310.0
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 309.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 308.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 308.7
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 308.4
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 307.0
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 306.1
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 305.6
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 305.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 303.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 303.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 302.1
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 301.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 297.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 296.4
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 294.4
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 293.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 291.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 291.2
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 289.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 288.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 288.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 287.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 286.9
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 286.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 284.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 282.5
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 281.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 279.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 279.1
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 278.4
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 277.7
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 277.2
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 276.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 275.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 274.5
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 273.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 273.8
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 268.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 267.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 265.6
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 265.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 265.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 263.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 260.9
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 257.5
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 256.6
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 255.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 254.6
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 251.4
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 249.9
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 248.6
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 244.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 242.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 240.8
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 230.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 226.6
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 225.0
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 222.9
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 221.4
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 220.5
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 218.0
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 199.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 175.8
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 140.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 140.1
FF:10151-102I7 76 years, female 140.1

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 145.2
Pig sample Sample description nTPM
Amygdala
nTPM: 145.2
Samples: 4

Max nTPM: 176.4
Min nTPM: 116.1
Sample A Female 176.4
Sample B Female 162.7
Sample C Male 125.6
Sample D Male 116.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 165.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 165.0
Samples: 4

Max nTPM: 171.6
Min nTPM: 157.9
Sample A Male 164.5
Sample B Male 171.6
Sample C Female 166.0
Sample D Female 157.9

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 6.5
68637778 Antisense, RP_050126_01_F01, Mouse strain C57BL/6J (56 days, male) 6.5

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