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GABARAPL2
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:90.1 nTPM
HPA:70.8 nTPM
GTEx:90.1 nTPM
FANTOM5:70.5 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA036726
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 70.8
overview
Male, age 65
Small intestine sample 232
nTPM: 68.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 77.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 66.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 70.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 90.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 90.1
Samples: 187

Max nTPM: 183.1
Min nTPM: 63.5
Std nTPM: 18.8
Median nTPM: 85.1
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 183.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 152.4
GTEX-1192X-2526-SM-59868 50-59 years, male 148.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 142.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 135.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 126.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 126.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 126.1
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 125.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 125.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 124.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 124.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 123.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 122.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 122.7
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 119.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 117.6
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 116.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 115.0
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 114.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 112.9
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 112.6
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 112.6
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 112.2
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 111.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 111.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 109.3
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 107.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 107.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 107.0
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 107.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 106.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 105.1
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 104.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 104.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 104.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 103.5
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 103.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 102.2
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 102.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 101.6
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 101.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 100.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 100.7
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 100.2
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 100.2
GTEX-14PK6-1626-SM-6871I 70-79 years, female 100.2
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 99.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 99.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 99.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 98.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 97.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 97.6
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 97.2
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 96.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 96.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 95.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 95.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 95.4
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 95.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 95.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 93.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 93.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 93.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 93.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 93.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 93.4
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 93.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 93.1
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 93.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 92.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 92.5
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 92.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 92.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 91.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 91.7
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 90.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 90.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 90.0
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 90.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 89.6
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 89.4
GTEX-14PKU-1626-SM-6871C 40-49 years, female 89.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 89.0
GTEX-1122O-1326-SM-5H11F 60-69 years, female 88.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 88.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 88.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 87.7
GTEX-ZTSS-0926-SM-59865 40-49 years, male 87.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 87.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 87.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 86.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 86.5
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 85.1
GTEX-13111-1426-SM-5DUW3 50-59 years, male 84.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 84.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 84.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 84.3
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 84.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 84.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 84.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 84.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 83.7
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 83.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 83.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 83.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 83.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 82.8
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 82.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 82.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 81.9
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 81.7
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 81.5
GTEX-183FY-1626-SM-793D8 20-29 years, male 81.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 81.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 81.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 80.9
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 80.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 80.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 80.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 80.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 80.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 80.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 80.0
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 79.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 79.9
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 79.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 79.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 79.3
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 79.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 79.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 78.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 78.5
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 78.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 78.0
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 78.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 77.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 77.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 77.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 76.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 76.5
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 76.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 76.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 75.8
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 75.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 74.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 74.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 74.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 74.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 74.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 74.0
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 74.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 73.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 73.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 73.7
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 73.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 73.1
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 72.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 72.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 72.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 72.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 71.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 71.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 70.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 70.5
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 70.3
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 70.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 70.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 70.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 69.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 69.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 69.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 69.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 68.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 67.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 67.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 67.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 67.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 66.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 66.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 66.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 66.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 66.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 66.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 63.9
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 63.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 63.5
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 70.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 70.5
FF:10024-101D6 15,40,85 years, mixed 70.5

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