PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:85.8 nTPM
HPA:85.8 nTPM
FANTOM5:230.8 Scaled Tags Per Million
Pig:136.4 nTPM
Mouse:271.0 nTPM
Allen mouse:5.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 85.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 72.3
2188 Female, age 91, both hemispheres 79.1
2301 Female, age 85, both hemispheres 74.6
2090 Male, age 80, both hemispheres 74.2
1984 Male, age 76, both hemispheres 61.3
Area postrema
nTPM: 60.9
2306 Male, age 80, both hemispheres 69.9
2054 Male, age 76, both hemispheres 59.4
2799 Male, age 61, both hemispheres 53.3
Cuneate nuclei
nTPM: 65.6
2381 Male, age 80, both hemispheres 70.9
2376 Male, age 61, both hemispheres 64.9
2131 Male, age 76, both hemispheres 61.0
Dorsal cochlear nucleus
nTPM: 67.4
2187 Female, age 91, both hemispheres 78.9
2378 Male, age 80, both hemispheres 68.9
2802 Male, age 74, right hemisphere 63.8
2370 Male, age 61, both hemispheres 63.3
2058 Male, age 76, both hemispheres 62.0
Dorsal medullary reticular nucleus
nTPM: 67.0
2040 Female, age 85, both hemispheres 80.1
2373 Male, age 61, both hemispheres 61.0
2088 Male, age 76, both hemispheres 59.9
Dorsal motor vagal complex
nTPM: 62.3
2133 Female, age 91, both hemispheres 71.7
2000 Male, age 74, unknown 69.8
2813 Female, age 72, unknown 65.9
2844 Male, age 55, unknown 65.8
2807 Female, age 85, both hemispheres 60.4
2185 Male, age 76, both hemispheres 57.8
2643 Male, age 74, both hemispheres 56.9
2797 Male, age 61, both hemispheres 50.4
Dorsal tegmental nucleus
nTPM: 69.0
2326 Male, age 74, both hemispheres 74.1
2083 Male, age 80, both hemispheres 73.5
2358 Male, age 61, both hemispheres 66.7
1936 Male, age 76, left hemisphere 61.9
Dorsolateral tegmental area
nTPM: 71.8
2751 Female, age 85, both hemispheres 81.3
2654 Male, age 80, both hemispheres 76.0
2337 Male, age 61, both hemispheres 74.6
2360 Male, age 74, both hemispheres 67.2
2141 Male, age 76, both hemispheres 60.1
Gigantocellular reticular nuclei, medullary
nTPM: 69.7
1876 Female, age 85, both hemispheres 77.5
2314 Male, age 61, both hemispheres 74.5
2387 Female, age 91, both hemispheres 73.8
2022 Male, age 76, right hemisphere 65.7
2310 Male, age 80, both hemispheres 65.2
2462 Male, age 74, both hemispheres 61.5
Gigantocellular reticular nuclei, pars
nTPM: 65.8
2084 Female, age 85, both hemispheres 70.6
2168 Male, age 76, both hemispheres 69.9
2336 Male, age 61, both hemispheres 63.6
2706 Male, age 80, both hemispheres 63.2
2330 Male, age 80, both hemispheres 61.9
Inferior olive
nTPM: 72.1
2563 Male, age 74, both hemispheres 79.1
2178 Male, age 61, both hemispheres 73.0
2085 Female, age 85, both hemispheres 71.6
2379 Male, age 80, both hemispheres 68.5
2628 Female, age 91, both hemispheres 68.4
Kolliker-Fuse nucleus
nTPM: 72.3
2793 Female, age 91, left hemisphere 74.1
2163 Male, age 80, both hemispheres 74.0
2315 Male, age 76, right hemisphere 68.7
Lateral lemniscal nuclei
nTPM: 69.4
2169 Male, age 76, both hemispheres 73.6
2746 Female, age 85, left hemisphere 73.2
2036 Male, age 80, both hemispheres 69.7
2320 Female, age 91, left hemisphere 66.8
2453 Male, age 74, right hemisphere 63.8
Lateral medullary reticular nucleus
nTPM: 76.4
2305 Male, age 74, both hemispheres 94.4
2852 Male, age 80, both hemispheres 75.0
2190 Female, age 85, both hemispheres 74.5
2804 Female, age 91, both hemispheres 73.1
2044 Male, age 76, both hemispheres 71.3
2374 Male, age 61, both hemispheres 70.1
Lateral parabrachial nucleus
nTPM: 69.2
2013 Male, age 80, both hemispheres 74.5
2792 Male, age 76, both hemispheres 73.3
2139 Female, age 85, right hemisphere 70.8
2790 Male, age 61, both hemispheres 58.3
Lateral vestibular nucleus
nTPM: 69.8
2311 Male, age 80, both hemispheres 70.9
2184 Male, age 76, both hemispheres 68.8
Locus coeruleus
nTPM: 74.1
2014 Male, age 55, unknown 85.2
2788 Male, age 74, unknown 79.5
2123 Female, age 91, both hemispheres 77.4
1980 Male, age 76, both hemispheres 71.7
2317 Female, age 72, unknown 69.4
2720 Male, age 74, both hemispheres 68.8
2162 Male, age 80, both hemispheres 66.8
Medial olivary nucleus
nTPM: 82.6
1943 Male, age 61, both hemispheres 91.2
1962 Male, age 76, both hemispheres 84.9
2138 Female, age 91, both hemispheres 80.0
2851 Male, age 80, both hemispheres 74.5
Medial parabrachial nucleus
nTPM: 71.0
2170 Female, age 91, both hemispheres 84.0
2854 Male, age 80, both hemispheres 76.0
2463 Female, age 85, right hemisphere 70.3
2786 Male, age 76, both hemispheres 65.4
2156 Male, age 61, both hemispheres 59.5
Medial periolivary nuclei
nTPM: 73.3
2791 Male, age 74, right hemisphere 79.2
2063 Male, age 76, both hemispheres 77.8
2081 Male, age 80, both hemispheres 71.1
2171 Female, age 85, both hemispheres 71.0
2458 Female, age 91, both hemispheres 67.7
Medial vestibular nucleus
nTPM: 73.4
2801 Male, age 74, both hemispheres 83.8
2803 Female, age 91, both hemispheres 77.0
2093 Male, age 80, both hemispheres 72.0
2624 Male, age 61, both hemispheres 71.0
2134 Male, age 76, both hemispheres 69.2
2743 Female, age 85, both hemispheres 67.3
Motor facial nucleus
nTPM: 69.3
2365 Male, age 74, right hemisphere 80.8
2062 Male, age 76, both hemispheres 73.8
2697 Female, age 85, both hemispheres 71.1
2126 Male, age 61, both hemispheres 68.1
2795 Female, age 91, both hemispheres 64.1
2327 Male, age 80, both hemispheres 58.1
Motor hypoglossal nucleus
nTPM: 69.9
2132 Female, age 85, both hemispheres 75.4
2125 Female, age 91, both hemispheres 75.3
2182 Male, age 80, both hemispheres 71.3
2461 Male, age 61, both hemispheres 71.2
2277 Male, age 76, both hemispheres 56.2
Motor trigeminal nucleus
nTPM: 65.8
2560 Male, age 74, both hemispheres 69.6
2309 Male, age 76, both hemispheres 65.3
2321 Female, age 91, both hemispheres 65.3
2079 Male, age 80, both hemispheres 64.6
2335 Male, age 61, both hemispheres 64.1
Nuclei of the trapezoid body
nTPM: 69.9
1983 Male, age 76, both hemispheres 78.3
2159 Male, age 61, both hemispheres 74.0
2735 Female, age 85, both hemispheres 69.6
2166 Male, age 80, both hemispheres 65.6
2368 Female, age 91, both hemispheres 62.1
Nucleus ambiguus
nTPM: 65.6
2071 Male, age 76, both hemispheres 76.6
2096 Female, age 85, both hemispheres 54.5
Nucleus cuneatus
nTPM: 65.6
2380 Male, age 80, both hemispheres 77.6
2808 Female, age 85, both hemispheres 73.1
2564 Male, age 74, both hemispheres 68.8
2100 Male, age 76, both hemispheres 60.3
2562 Male, age 61, both hemispheres 57.0
2805 Female, age 91, both hemispheres 56.9
Nucleus gracilis
nTPM: 71.5
2627 Male, age 74, both hemispheres 79.5
2382 Male, age 80, both hemispheres 73.6
2299 Female, age 85, both hemispheres 61.4
Nucleus raphe magnus
nTPM: 70.6
2160 Male, age 61, both hemispheres 79.1
2455 Male, age 74, both hemispheres 71.2
2051 Male, age 76, both hemispheres 70.8
2459 Female, age 91, both hemispheres 68.4
2172 Female, age 85, both hemispheres 67.4
2328 Male, age 80, both hemispheres 66.5
Nucleus raphe obscurus
nTPM: 77.6
2845 Female, age 85, midline 86.3
2142 Male, age 76, midline 74.1
2800 Male, age 61, midline 72.5
Nucleus raphe pallidus
nTPM: 85.8
1924 Male, age 61, midline 93.9
2145 Male, age 76, midline 83.4
2183 Male, age 80, midline 80.0
Nucleus tractus solitarii
nTPM: 62.2
2144 Female, age 91, right hemisphere 77.9
2191 Female, age 85, both hemispheres 60.2
2656 Male, age 76, both hemispheres 60.0
2307 Male, age 80, both hemispheres 50.9
Paramedian reticular nucleus
nTPM: 76.3
2052 Male, age 76, both hemispheres 80.4
2050 Female, age 85, both hemispheres 76.6
2057 Male, age 80, both hemispheres 75.0
2313 Male, age 61, both hemispheres 73.3
Parvicellular reticular nuclei
nTPM: 68.8
2119 Male, age 80, both hemispheres 77.4
2095 Male, age 76, both hemispheres 71.2
2558 Male, age 74, both hemispheres 57.9
Parvicellular reticular nuclei, medullary
nTPM: 69.6
2189 Female, age 91, both hemispheres 73.6
2091 Female, age 85, both hemispheres 70.7
2181 Male, age 80, left hemisphere 64.7
Peritrigeminal nucleus
nTPM: 75.1
2067 Female, age 85, both hemispheres 78.9
2136 Male, age 76, both hemispheres 74.2
2179 Male, age 61, both hemispheres 72.0
Pontine nuclei
nTPM: 76.0
2454 Male, age 74, left hemisphere 83.5
2727 Male, age 61, right hemisphere 82.6
1863 Male, age 55, unknown 78.6
2319 Female, age 91, both hemispheres 76.2
2109 Female, age 72, unknown 74.8
2787 Female, age 85, both hemispheres 74.3
1968 Male, age 76, left hemisphere 73.1
2115 Male, age 80, left hemisphere 64.9
Pontine raphe nucleus
nTPM: 69.0
2122 Female, age 85, midline 71.3
2853 Male, age 76, midline 66.7
Posteroventral cochlear nucleus
nTPM: 73.8
2341 Male, age 80, both hemispheres 84.9
2135 Female, age 91, both hemispheres 82.3
2752 Female, age 85, both hemispheres 71.0
2070 Male, age 76, both hemispheres 69.5
2371 Male, age 61, both hemispheres 61.5
Prepositus hypoglossal nucleus
nTPM: 72.6
2855 Female, age 85, right hemisphere 80.3
2086 Male, age 80, both hemispheres 64.9
Principal sensory trigeminal nucleus
nTPM: 69.8
2367 Female, age 91, left hemisphere 76.1
2158 Male, age 61, both hemispheres 68.7
2008 Male, age 80, left hemisphere 68.6
2324 Male, age 76, both hemispheres 65.9
Reticular pontine nucleus, caudal
nTPM: 69.2
2092 Male, age 76, both hemispheres 73.8
2559 Male, age 74, both hemispheres 73.0
2457 Female, age 91, both hemispheres 69.5
2332 Male, age 80, right hemisphere 60.4
Reticular pontine nucleus, oral
nTPM: 74.2
2361 Male, age 74, both hemispheres 77.4
1939 Male, age 80, both hemispheres 75.9
2012 Female, age 85, both hemispheres 75.1
2366 Female, age 91, both hemispheres 72.9
2167 Male, age 76, both hemispheres 69.4
Reticulotegmental nucleus
nTPM: 66.5
2322 Female, age 91, both hemispheres 71.0
2325 Male, age 76, both hemispheres 68.3
2333 Male, age 80, both hemispheres 63.8
2452 Male, age 74, both hemispheres 63.0
Spinal trigeminal nucleus, caudal
nTPM: 68.9
2390 Female, age 91, both hemispheres 77.0
2312 Male, age 61, both hemispheres 70.7
2308 Male, age 80, both hemispheres 66.1
2642 Male, age 74, both hemispheres 65.8
2447 Male, age 76, both hemispheres 65.1
Spinal trigeminal nucleus, interpolar
nTPM: 72.9
2625 Male, age 61, both hemispheres 81.0
2066 Male, age 76, right hemisphere 73.4
2033 Male, age 80, both hemispheres 71.9
2386 Female, age 85, both hemispheres 70.8
2389 Female, age 91, both hemispheres 67.3
Spinal trigeminal nucleus, oral
nTPM: 66.8
2737 Female, age 85, both hemispheres 69.0
2164 Male, age 80, both hemispheres 68.9
1978 Male, age 76, both hemispheres 62.6
Spinal vestibular nucleus
nTPM: 70.5
2806 Female, age 85, both hemispheres 75.3
2748 Male, age 76, both hemispheres 72.9
2186 Female, age 91, both hemispheres 71.4
2780 Male, age 80, both hemispheres 70.1
2384 Male, age 74, both hemispheres 66.9
2796 Male, age 61, both hemispheres 66.4
Subcoeruleus area
nTPM: 69.4
2369 Female, age 85, left hemisphere 81.5
1958 Male, age 80, both hemispheres 71.8
2323 Female, age 91, left hemisphere 68.1
2089 Male, age 76, left hemisphere 64.5
2451 Male, age 74, both hemispheres 61.1
Superior olive
nTPM: 73.3
2364 Male, age 74, right hemisphere 82.6
2020 Male, age 76, both hemispheres 76.0
1875 Female, age 85, both hemispheres 75.8
2329 Male, age 80, right hemisphere 66.6
2561 Female, age 91, both hemispheres 65.5
Superior vestibular nucleus
nTPM: 72.8
2383 Male, age 74, both hemispheres 78.4
2015 Male, age 80, both hemispheres 74.5
2061 Male, age 76, both hemispheres 65.4
Ventral medullary reticular nucleus
nTPM: 67.8
2060 Male, age 76, both hemispheres 68.2
2372 Male, age 61, both hemispheres 67.5
Ventral periolivary nuclei
nTPM: 70.5
2023 Male, age 76, both hemispheres 79.2
2130 Female, age 85, both hemispheres 72.7
2165 Male, age 80, both hemispheres 68.1
2794 Female, age 91, left hemisphere 62.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 72.9
2741 Female, age 85, both hemispheres 75.9
2118 Male, age 80, both hemispheres 75.3
2180 Male, age 61, both hemispheres 72.3
1986 Male, age 76, both hemispheres 71.1
2302 Female, age 91, both hemispheres 70.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 69.1
2840 Female, age 85, both hemispheres 74.8
1959 Male, age 76, both hemispheres 70.9
2359 Male, age 61, both hemispheres 69.3
2161 Male, age 80, both hemispheres 67.4
2456 Female, age 91, both hemispheres 66.9
2449 Male, age 74, both hemispheres 65.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 230.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 230.8
FF:10182-103D2 60 years, female 280.8
FF:10165-103B3 76 years, female 180.8
Medulla oblongata
Scaled Tags Per Million: 193.3
FF:10174-103C3 60 years, female 207.6
FF:10038-101F2 18-64 years, mixed 189.3
FF:10155-103A2 76 years, female 183.0
Pons
Scaled Tags Per Million: 210.2
FF:10033-101E6 18-54 years, mixed 210.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 136.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 130.9
Samples: 4

Max nTPM: 138.7
Min nTPM: 111.9
Sample A Female 136.3
Sample B Female 111.9
Sample C Male 136.8
Sample D Male 138.7
Pons
nTPM: 136.4
Samples: 4

Max nTPM: 166.5
Min nTPM: 102.8
Sample A Female 166.5
Sample B Female 102.8
Sample C Male 127.2
Sample D Male 149.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 271.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 270.9
Samples: 4

Max nTPM: 286.4
Min nTPM: 251.7
Sample A Male 265.5
Sample B Male 286.4
Sample C Female 251.7
Sample D Female 280.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.4
492 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 5.4
491 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 5.3
Pons
Expression energy: 5.3
491 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 5.3
492 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

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