HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:100.1 nTPM
HPA:100.1 nTPM
GTEx:94.2 nTPM
FANTOM5:46.6 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:2.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073947
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.1
Sample id Sample description nTPM
Hippocampus
nTPM: 96.0
1898 Male, age 80, left hemisphere 102.9
2148 Female, age 91, left hemisphere 96.4
2529 Female, age 94, left hemisphere 96.3
2621 Female, age 67, right hemisphere 94.3
1855 Male, age 76, left hemisphere 93.2
1911 Female, age 85, right hemisphere 93.2
Dentate gyrus
nTPM: 95.0
1927 Female, age 91, both hemispheres 98.0
2010 Male, age 76, both hemispheres 96.8
2528 Male, age 74, both hemispheres 96.1
2530 Female, age 94, left hemisphere 94.5
2246 Female, age 85, both hemispheres 93.5
2531 Female, age 67, both hemispheres 91.2
Entorhinal gyrus
nTPM: 94.5
1787 Male, age 76, left hemisphere 97.4
2764 Male, age 80, right hemisphere 97.1
1938 Female, age 85, left hemisphere 97.0
2686 Male, age 75, right hemisphere 92.8
2117 Female, age 91, right hemisphere 91.8
2613 Female, age 94, left hemisphere 90.7
Hippocampus, CA1
nTPM: 97.6
2749 Male, age 80, left hemisphere 107.6
2527 Male, age 74, both hemispheres 97.6
1873 Female, age 85, both hemispheres 94.3
2082 Female, age 91, right hemisphere 94.3
2045 Male, age 76, both hemispheres 94.0
Hippocampus, CA2
nTPM: 97.0
1963 Male, age 80, left hemisphere 100.1
2249 Male, age 74, both hemispheres 100.1
1892 Male, age 76, both hemispheres 99.8
2437 Female, age 94, left hemisphere 96.2
1940 Female, age 85, left hemisphere 93.7
2113 Female, age 91, right hemisphere 92.1
Hippocampus, CA3
nTPM: 97.7
2436 Male, age 74, both hemispheres 101.1
2137 Male, age 80, left hemisphere 98.6
2861 Female, age 67, both hemispheres 98.2
1867 Male, age 76, both hemispheres 98.0
2620 Female, age 94, left hemisphere 95.7
1891 Female, age 85, both hemispheres 94.5
Parahippocampal cortex
nTPM: 95.1
1850 Male, age 80, both hemispheres 98.2
2250 Female, age 67, right hemisphere 97.6
2018 Male, age 76, both hemispheres 96.5
1933 Female, age 85, both hemispheres 96.0
2532 Female, age 72, left hemisphere 95.9
2245 Female, age 91, both hemispheres 95.6
1990 Female, age 91, right hemisphere 94.9
2622 Female, age 67, right hemisphere 93.3
2693 Female, age 94, both hemispheres 92.6
2692 Male, age 74, both hemispheres 90.4
Perirhinal gyrus
nTPM: 100.1
1847 Female, age 91, left hemisphere 105.2
1794 Male, age 80, right hemisphere 103.8
1841 Female, age 85, right hemisphere 99.2
2521 Female, age 94, right hemisphere 96.1
2848 Male, age 76, right hemisphere 96.1
Subiculum
nTPM: 95.2
1977 Female, age 85, both hemispheres 97.9
2619 Male, age 74, both hemispheres 97.6
2438 Female, age 94, left hemisphere 95.6
1901 Male, age 80, both hemispheres 95.0
2729 Female, age 91, right hemisphere 92.8
2042 Male, age 76, both hemispheres 92.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.2
Samples: 197

Max nTPM: 243.6
Min nTPM: 52.5
Std nTPM: 27.5
Median nTPM: 89.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 243.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 207.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 185.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 175.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 167.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 160.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 159.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 159.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 152.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 152.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 151.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.6
FF:10169-103B7 60 years, female 49.1
FF:10153-102I9 76 years, female 44.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.1
Sample A Female 13.6
Sample B Female 9.4
Sample C Male 10.9
Sample D Male 9.1
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.8
Sample A Female 10.9
Sample B Female 12.6
Sample C Male 10.7
Sample D Male 9.8
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 13.4
Min nTPM: 8.4
Sample A Female 13.4
Sample B Female 9.0
Sample C Male 8.4
Sample D Male 8.5
Ventral hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.0
Sample A Female 11.3
Sample B Female 8.0
Sample C Male 11.0
Sample D Male 10.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 4.3
Min nTPM: 1.8
Sample A Male 1.8
Sample B Male 4.3
Sample C Female 3.1
Sample D Female 1.9
Hippocampal formation
nTPM: 2.4
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.0
Sample A Male 2.7
Sample B Male 2.0
Sample C Female 3.9
Sample D Female 1.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70546209 Antisense, RP_050623_03_G05, Mouse strain C57BL/6J (56 days, male) 0.2

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