HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:59.1 nTPM
HPA:59.1 nTPM
GTEx:50.0 nTPM
FANTOM5:43.5 Scaled Tags Per Million
Pig:36.7 nTPM
Mouse:115.7 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018811
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.1
Sample id Sample description nTPM
Hippocampus
nTPM: 52.7
1855 Male, age 76, left hemisphere 59.2
1898 Male, age 80, left hemisphere 55.0
2148 Female, age 91, left hemisphere 52.9
1911 Female, age 85, right hemisphere 50.8
2621 Female, age 67, right hemisphere 50.4
2529 Female, age 94, left hemisphere 48.0
Dentate gyrus
nTPM: 51.3
2010 Male, age 76, both hemispheres 58.9
1927 Female, age 91, both hemispheres 57.6
2246 Female, age 85, both hemispheres 48.8
2531 Female, age 67, both hemispheres 48.2
2528 Male, age 74, both hemispheres 47.3
2530 Female, age 94, left hemisphere 47.3
Entorhinal gyrus
nTPM: 47.6
1787 Male, age 76, left hemisphere 53.6
1938 Female, age 85, left hemisphere 49.9
2764 Male, age 80, right hemisphere 47.6
2117 Female, age 91, right hemisphere 46.5
2613 Female, age 94, left hemisphere 44.0
2686 Male, age 75, right hemisphere 44.0
Hippocampus, CA1
nTPM: 59.1
2749 Male, age 80, left hemisphere 82.7
2045 Male, age 76, both hemispheres 63.9
1873 Female, age 85, both hemispheres 54.5
2527 Male, age 74, both hemispheres 51.7
2082 Female, age 91, right hemisphere 42.9
Hippocampus, CA2
nTPM: 50.6
1963 Male, age 80, left hemisphere 62.4
1892 Male, age 76, both hemispheres 56.2
1940 Female, age 85, left hemisphere 47.7
2249 Male, age 74, both hemispheres 47.5
2437 Female, age 94, left hemisphere 45.8
2113 Female, age 91, right hemisphere 44.1
Hippocampus, CA3
nTPM: 56.1
2137 Male, age 80, left hemisphere 79.9
1867 Male, age 76, both hemispheres 58.0
2620 Female, age 94, left hemisphere 52.4
1891 Female, age 85, both hemispheres 49.7
2861 Female, age 67, both hemispheres 48.9
2436 Male, age 74, both hemispheres 47.4
Parahippocampal cortex
nTPM: 48.2
1933 Female, age 85, both hemispheres 52.6
2245 Female, age 91, both hemispheres 50.8
2250 Female, age 67, right hemisphere 50.2
2692 Male, age 74, both hemispheres 48.7
1850 Male, age 80, both hemispheres 48.4
1990 Female, age 91, right hemisphere 48.0
2018 Male, age 76, both hemispheres 47.5
2532 Female, age 72, left hemisphere 47.5
2693 Female, age 94, both hemispheres 44.7
2622 Female, age 67, right hemisphere 44.2
Perirhinal gyrus
nTPM: 49.8
2521 Female, age 94, right hemisphere 54.7
1847 Female, age 91, left hemisphere 53.8
1794 Male, age 80, right hemisphere 48.7
1841 Female, age 85, right hemisphere 46.9
2848 Male, age 76, right hemisphere 44.8
Subiculum
nTPM: 51.1
1901 Male, age 80, both hemispheres 59.1
1977 Female, age 85, both hemispheres 51.7
2042 Male, age 76, both hemispheres 51.7
2438 Female, age 94, left hemisphere 48.6
2729 Female, age 91, right hemisphere 48.4
2619 Male, age 74, both hemispheres 47.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.0
Samples: 197

Max nTPM: 98.7
Min nTPM: 27.9
Std nTPM: 12.2
Median nTPM: 48.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 98.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 85.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 85.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 84.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 81.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 79.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 77.9
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 77.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 75.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 74.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 72.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.5
FF:10153-102I9 76 years, female 47.3
FF:10169-103B7 60 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.7
Samples: 4

Max nTPM: 43.2
Min nTPM: 30.1
Sample A Female 43.2
Sample B Female 38.9
Sample C Male 30.1
Sample D Male 34.6
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 30.5
Min nTPM: 27.0
Sample A Female 29.8
Sample B Female 30.5
Sample C Male 28.2
Sample D Male 27.0
Subiculum
nTPM: 32.0
Samples: 4

Max nTPM: 38.2
Min nTPM: 27.7
Sample A Female 38.2
Sample B Female 32.3
Sample C Male 29.9
Sample D Male 27.7
Ventral hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 38.8
Min nTPM: 25.2
Sample A Female 30.6
Sample B Female 25.2
Sample C Male 35.5
Sample D Male 38.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 115.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.4
Samples: 4

Max nTPM: 91.6
Min nTPM: 82.3
Sample A Male 85.3
Sample B Male 82.3
Sample C Female 91.6
Sample D Female 86.5
Hippocampal formation
nTPM: 115.7
Samples: 4

Max nTPM: 124.7
Min nTPM: 106.1
Sample A Male 106.1
Sample B Male 120.6
Sample C Female 124.7
Sample D Female 111.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
68498884 Antisense, RP_050113_02_E07, Mouse strain C57BL/6J (56 days, male) 10.8
71015802 Antisense, RP_050725_02_H02, Mouse strain C57BL/6J (56 days, male) 9.1

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The Human Protein Atlas

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