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BCAS1
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  • BCAS1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:267.1 nTPM
FANTOM5:133.2 Scaled Tags Per Million
Pig:59.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA051816Antibody HPA054745Antibody CAB033558
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 267.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 267.1
Samples: 246

Max nTPM: 1597.9
Min nTPM: 32.6
Std nTPM: 210.5
Median nTPM: 204.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1597.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1316.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1093.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 880.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 875.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 846.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 824.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 781.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 734.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 698.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 694.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 668.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 662.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 623.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 619.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 617.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 611.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 609.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 598.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 590.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 554.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 538.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 502.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 502.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 501.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 500.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 497.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 492.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 488.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 485.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 484.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 480.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 470.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 464.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 464.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 463.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 461.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 446.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 442.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 429.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 417.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 415.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 414.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 412.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 403.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 397.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 395.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 391.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 384.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 365.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 362.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 359.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 356.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 355.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 354.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 354.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 353.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 342.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 342.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 339.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 338.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 333.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 332.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 332.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 328.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 327.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 324.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 319.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 318.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 317.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 314.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 311.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 311.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 310.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 310.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 308.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 305.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 302.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 301.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 299.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 295.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 292.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 291.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 289.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 288.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 287.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 287.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 281.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 278.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 275.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 275.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 275.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 270.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 270.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 268.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 267.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 262.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 257.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 256.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 250.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 250.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 247.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 244.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 243.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 242.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 242.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 237.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 232.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 232.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 227.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 223.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 221.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 217.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 217.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 215.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 214.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 212.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 212.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 210.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 207.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 206.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 206.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 205.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 203.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 202.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 201.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 198.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 197.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 197.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 195.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 195.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 194.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 191.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 190.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 187.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 187.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 187.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 183.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 180.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 177.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 176.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 174.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 174.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 170.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 170.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 169.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 165.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 164.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 162.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 162.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 160.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 159.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 158.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 155.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 154.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 152.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 151.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 151.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 148.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 148.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 145.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 143.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 143.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 143.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 142.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 141.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 141.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 141.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 139.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 138.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 138.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 137.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 135.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 135.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 135.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 135.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 134.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 133.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 133.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 133.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 133.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 131.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 131.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 130.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 130.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 129.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 128.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 126.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 124.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 122.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 118.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 116.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 116.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 114.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 110.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 110.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 109.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 107.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 107.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 106.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 104.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 104.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 104.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 103.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 102.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 102.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 101.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 101.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 96.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 96.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 96.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 94.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 94.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 93.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 89.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 88.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 86.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 83.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 78.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 76.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 75.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 74.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 72.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 72.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 71.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 71.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 67.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 66.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 66.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 62.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 59.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 50.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 48.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 45.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 32.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 133.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 133.2
FF:10164-103B2 76 years, female 133.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 59.8
Pig sample Sample description nTPM
Caudate
nTPM: 59.8
Samples: 4

Max nTPM: 73.7
Min nTPM: 43.3
Sample A Female 67.8
Sample B Female 43.3
Sample C Male 73.7
Sample D Male 54.5

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