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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:259.3 nTPM
HPA:259.3 nTPM
GTEx:350.1 nTPM
FANTOM5:510.1 Scaled Tags Per Million
Pig:125.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 259.3
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 246.0
1981 Female, age 72, midline 274.5
2048 Male, age 55, midline 261.8
2816 Male, age 47, midline 236.8
2194 Female, age 79, both hemispheres 229.2
2565 Male, age 75, midline 227.9
Cervical spinal cord, dorsal horn
nTPM: 253.9
2173 Female, age 72, unknown 296.5
2296 Male, age 66, both hemispheres 291.9
2069 Male, age 47, both hemispheres 256.7
1877 Male, age 55, unknown 242.7
2721 Male, age 90, both hemispheres 225.0
2297 Male, age 75, both hemispheres 210.3
Cervical spinal cord, ventral horn
nTPM: 259.3
2098 Female, age 72, unknown 316.0
2809 Male, age 90, both hemispheres 270.2
2295 Male, age 66, both hemispheres 260.8
2480 Male, age 75, both hemispheres 257.5
2068 Male, age 55, unknown 229.7
2820 Female, age 79, both hemispheres 221.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 350.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 350.1
Samples: 159

Max nTPM: 521.6
Min nTPM: 176.1
Std nTPM: 64.8
Median nTPM: 354.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 521.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 513.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 490.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 468.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 463.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 460.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 456.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 456.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 455.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 451.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 446.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 442.1
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 441.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 441.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 440.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 438.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 433.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 431.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 430.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 427.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 423.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 415.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 414.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 413.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 409.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 407.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 406.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 404.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 400.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 400.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 400.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 399.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 398.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 396.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 395.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 393.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 392.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 391.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 391.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 389.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 388.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 388.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 387.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 387.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 386.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 385.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 383.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 383.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 383.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 383.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 381.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 381.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 380.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 380.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 379.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 378.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 373.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 373.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 372.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 371.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 371.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 369.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 369.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 367.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 367.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 366.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 365.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 365.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 364.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 364.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 364.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 364.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 362.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 362.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 360.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 359.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 359.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 355.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 355.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 354.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 353.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 353.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 351.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 350.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 349.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 348.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 346.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 345.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 345.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 342.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 339.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 339.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 337.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 337.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 337.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 336.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 336.4
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 336.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 334.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 331.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 329.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 327.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 327.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 326.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 324.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 324.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 324.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 322.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 322.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 322.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 322.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 320.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 320.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 319.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 318.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 318.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 315.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 315.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 314.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 312.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 311.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 311.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 310.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 308.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 308.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 307.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 304.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 302.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 297.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 296.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 295.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 292.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 289.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 289.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 281.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 280.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 272.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 271.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 271.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 270.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 267.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 266.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 262.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 250.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 246.8
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 243.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 243.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 243.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 243.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 240.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 238.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 237.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 229.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 225.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 225.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 217.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 204.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 190.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 176.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 510.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 510.1
FF:10159-103A6 76 years, female 585.8
FF:10181-103D1 60 years, female 434.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 125.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 116.0
Samples: 4

Max nTPM: 141.4
Min nTPM: 93.8
Sample A Female 93.8
Sample B Female 118.4
Sample C Male 141.4
Sample D Male 110.2
Ventral spinal cord
nTPM: 125.5
Samples: 4

Max nTPM: 144.5
Min nTPM: 112.1
Sample A Female 112.1
Sample B Female 121.1
Sample C Male 124.1
Sample D Male 144.5

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